Simon J, Gross R, Einsle O, Kroneck P M, Kröger A, Klimmek O
Institut für Mikrobiologie, Johann Wolfgang Goethe-Universität, Marie-Curie-Str. 9, D-60439 Frankfurt am Main, Germany.
Mol Microbiol. 2000 Feb;35(3):686-96. doi: 10.1046/j.1365-2958.2000.01742.x.
Wolinella succinogenes can grow by anaerobic respiration with nitrate or nitrite using formate as electron donor. Two forms of nitrite reductase were isolated from the membrane fraction of W. succinogenes. One form consisted of a 58 kDa polypeptide (NrfA) that was identical to the periplasmic nitrite reductase. The other form consisted of NrfA and a 22 kDa polypeptide (NrfH). Both forms catalysed nitrite reduction by reduced benzyl viologen, but only the dimeric form catalysed nitrite reduction by dimethylnaphthoquinol. Liposomes containing heterodimeric nitrite reductase, formate dehydrogenase and menaquinone catalysed the electron transport from formate to nitrite; this was coupled to the generation of an electrochemical proton potential (positive outside) across the liposomal membrane. It is concluded that the electron transfer from menaquinol to the catalytic subunit (NrfA) of W. succinogenes nitrite reductase is mediated by NrfH. The structural genes nrfA and nrfH were identified in an apparent operon (nrfHAIJ) with two additional genes. The gene nrfA encodes the precursor of NrfA carrying an N-terminal signal peptide (22 residues). NrfA (485 residues) is predicted to be a hydrophilic protein that is similar to the NrfA proteins of Sulfurospirillum deleyianum and of Escherichia coli. NrfH (177 residues) is predicted to be a membrane-bound tetrahaem cytochrome c belonging to the NapC/NirT family. The products of nrfI and nrfJ resemble proteins involved in cytochrome c biogenesis. The C-terminal third of NrfI (902 amino acid residues) is similar to CcsA proteins from Gram-positive bacteria, cyanobacteria and chloroplasts. The residual N-terminal part of NrfI resembles Ccs1 proteins. The deduced NrfJ protein resembles the thioredoxin-like proteins (ResA) of Helicobacter pylori and of Bacillus subtilis, but lacks the common motif CxxC of ResA. The properties of three deletion mutants of W. succinogenes (DeltanrfJ, DeltanrfIJ and DeltanrfAIJ) were studied. Mutants DeltanrfAIJ and DeltanrfIJ did not grow with nitrite as terminal electron acceptor or with nitrate in the absence of NH4+ and lacked nitrite reductase activity, whereas mutant DeltanrfJ showed wild-type properties. The NrfA protein formed by mutant DeltanrfIJ seemed to lack part of the haem C, suggesting that NrfI is involved in NrfA maturation.
琥珀酸沃林氏菌能够利用甲酸盐作为电子供体,通过以硝酸盐或亚硝酸盐为电子受体的厌氧呼吸进行生长。从琥珀酸沃林氏菌的膜组分中分离出了两种形式的亚硝酸还原酶。一种形式由一条58 kDa的多肽(NrfA)组成,该多肽与周质亚硝酸还原酶相同。另一种形式由NrfA和一条22 kDa的多肽(NrfH)组成。两种形式都能催化由还原型苄基紫精还原亚硝酸盐,但只有二聚体形式能催化由二甲基萘醌还原亚硝酸盐。含有异源二聚体亚硝酸还原酶、甲酸脱氢酶和甲基萘醌的脂质体催化了从甲酸盐到亚硝酸盐的电子传递;这与跨脂质体膜产生电化学质子势(外侧为正)相偶联。得出的结论是,从甲基萘醌到琥珀酸沃林氏菌亚硝酸还原酶催化亚基(NrfA)的电子传递是由NrfH介导的。在一个明显的操纵子(nrfHAIJ)中鉴定出了结构基因nrfA和nrfH,该操纵子还有另外两个基因。基因nrfA编码携带N端信号肽(22个残基)的NrfA前体。NrfA(485个残基)预计是一种亲水性蛋白质,与德莱氏硫螺旋菌和大肠杆菌的NrfA蛋白质相似。NrfH(177个残基)预计是一种属于NapC/NirT家族的膜结合四血红素细胞色素c。nrfI和nrfJ的产物类似于参与细胞色素c生物合成的蛋白质。NrfI的C端三分之一(902个氨基酸残基)与革兰氏阳性菌、蓝细菌和叶绿体的CcsA蛋白质相似。NrfI剩余的N端部分类似于Ccs1蛋白质。推导的NrfJ蛋白质类似于幽门螺杆菌和枯草芽孢杆菌的硫氧还蛋白样蛋白质(ResA),但缺乏ResA的常见基序CxxC。研究了琥珀酸沃林氏菌的三个缺失突变体(DeltanrfJ、DeltanrfIJ和DeltanrfAIJ)特性。突变体DeltanrfAIJ和DeltanrfIJ在以亚硝酸盐作为末端电子受体时不能生长,在没有NH4+的情况下以硝酸盐为电子受体时也不能生长,并且缺乏亚硝酸还原酶活性,而突变体DeltanrfJ表现出野生型特性。由突变体DeltanrfIJ形成的NrfA蛋白质似乎缺少部分血红素C,这表明NrfI参与了NrfA的成熟。