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定位于7q31.2的FRA7G区域的人类TESTIN基因的特征分析。

Characterization of the human TESTIN gene localized in the FRA7G region at 7q31.2.

作者信息

Tatarelli C, Linnenbach A, Mimori K, Croce C M

机构信息

Kimmel Cancer Center, Thomas Jefferson University, Philadelphia, Pennsylvania 19107, USA.

出版信息

Genomics. 2000 Aug 15;68(1):1-12. doi: 10.1006/geno.2000.6272.

Abstract

Cancer-associated chromosomal aberrations often involve regions containing fragile sites. FRA7G is a common aphidicolin-inducible fragile site at 7q31.2, showing loss of heterozygosity in human malignancies. To investigate the structure of FRA7G, we constructed a bacterial artificial chromosome contig spanning the region between marker D7S486 and Met H. Analysis of the FRA7G sequence allowed us to identify a gene encoding a 421-amino-acid protein with three LIM domains and 89% identity to murine Testin. We determined the genomic structure of the human TESTIN locus and characterized three alternative transcripts. Although TESTIN mRNA is expressed in all normal human tissues examined, we observed lack of expression in 22% of cancer cell lines and 44% of the cell lines derived from hematological malignancies. We further determined that in most of these cases the inactivation of TESTIN expression is due to methylation of a CpG island. Analysis of the TESTIN coding region in 26 tumor cell lines revealed three missense mutations. Our findings suggest that TESTIN may represent a candidate tumor suppressor gene at 7q31.2.

摘要

癌症相关的染色体畸变常常涉及包含脆性位点的区域。FRA7G是位于7q31.2的一个常见的阿非科林诱导型脆性位点,在人类恶性肿瘤中表现出杂合性缺失。为了研究FRA7G的结构,我们构建了一个跨越标记D7S486和Met H之间区域的细菌人工染色体重叠群。对FRA7G序列的分析使我们能够鉴定出一个编码含三个LIM结构域的421个氨基酸蛋白质的基因,该基因与小鼠Testin的同源性为89%。我们确定了人类TESTIN基因座的基因组结构,并对三种可变转录本进行了表征。尽管TESTIN mRNA在所有检测的正常人体组织中均有表达,但我们观察到在22%的癌细胞系和44%源自血液系统恶性肿瘤的细胞系中缺乏表达。我们进一步确定,在大多数这些情况下,TESTIN表达的失活是由于一个CpG岛的甲基化。对26个肿瘤细胞系中TESTIN编码区的分析揭示了三个错义突变。我们的研究结果表明,TESTIN可能是7q31.2处的一个候选肿瘤抑制基因。

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