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脂质运载蛋白家族:结构与序列概述

The lipocalin protein family: structural and sequence overview.

作者信息

Flower D R, North A C, Sansom C E

机构信息

The Edward Jenner Institute for Vaccine Research, Newbury, Berkshire, UK.

出版信息

Biochim Biophys Acta. 2000 Oct 18;1482(1-2):9-24. doi: 10.1016/s0167-4838(00)00148-5.

Abstract

Lipocalins are remarkably diverse at the sequence level yet have highly conserved structures. Most lipocalins share three characteristic conserved sequence motifs - the kernel lipocalins - while others are more divergent family members - the outlier lipocalins - typically sharing only one or two. This classification is a useful tool for analysing the family, and within these large sets are smaller groups sharing much higher levels of sequence similarity. The lipocalins are also part of a larger protein superfamily: the calycins, which includes the fatty acid binding proteins, avidins, a group of metalloproteinase inhibitors, and triabin. The superfamily is characterised by a similar structure (a repeated +1 topology beta-barrel) and by the conservation of a remarkable structural signature.

摘要

脂笼蛋白在序列水平上具有显著的多样性,但结构高度保守。大多数脂笼蛋白共享三个特征性保守序列基序——核心脂笼蛋白,而其他则是差异较大的家族成员——异常脂笼蛋白,通常只共享一两个基序。这种分类是分析该家族的有用工具,在这些大的类别中还有更小的组,它们具有更高水平的序列相似性。脂笼蛋白也是一个更大的蛋白质超家族——萼囊蛋白的一部分,萼囊蛋白包括脂肪酸结合蛋白、抗生物素蛋白、一组金属蛋白酶抑制剂和triabin。该超家族的特征是具有相似的结构(重复的 +1 拓扑β桶)以及一个显著的结构特征的保守性。

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