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关于存在相互作用细胞系统的时空分形几何与基因表达动力学之间的关系。

On the relationship between fractal geometry of space and time in which a system of interacting cells exists and dynamics of gene expression.

作者信息

Waliszewski P, Molski M, Konarski J

机构信息

Department of Theoretical Chemistry, Adam Mickiewicz University, Poznań, Poland.

出版信息

Acta Biochim Pol. 2001;48(1):209-20.

Abstract

We report that both space and time, in which a system of interacting cells exists, possess fractal structure. Each single cell of the system can restore the hierarchical organization and dynamic features of the entire tumor. There is a relationship between dynamics of gene expression and connectivity (i.e., interconnectedness which denotes the existence of complex, dynamic relationships in a population of cells leading to the emergence of global features in the system that would never appear in a single cell existing out of the system). Fractal structure emerges owing to non-bijectivity of dynamic cellular network of genes and their regulatory elements. It disappears during tumor progression. This latter state is characterized by damped dynamics of gene expression, loss of connectivity, loss of collectivity (i.e., capability of the interconnected cells to interact in a common mode), and metastatic phenotype. Fractal structure of both space and time is necessary for a cellular system to self-organize. Our findings indicate that results of molecular studies on gene expression should be interpreted in terms of space-time geometry of the cellular system. In particular, the dynamics of gene expression in cancer cells existing in a malignant tumor is not identical with the dynamics of gene expression in the same cells cultured in the monolayer system.

摘要

我们报告称,存在相互作用细胞系统的空间和时间均具有分形结构。该系统中的每个单个细胞都能恢复整个肿瘤的层次组织和动态特征。基因表达动力学与连通性(即相互连接性,它表示细胞群体中存在复杂的动态关系,从而导致系统中出现单个细胞脱离该系统时永远不会出现的全局特征)之间存在关联。分形结构因基因及其调控元件的动态细胞网络的非双射性而出现。它在肿瘤进展过程中消失。后一种状态的特征是基因表达动力学的衰减、连通性丧失、集体性丧失(即相互连接的细胞以共同模式相互作用的能力)以及转移表型。空间和时间的分形结构对于细胞系统进行自组织是必要的。我们的研究结果表明,关于基因表达的分子研究结果应根据细胞系统的时空几何来解释。特别是,存在于恶性肿瘤中的癌细胞的基因表达动力学与在单层系统中培养的相同细胞的基因表达动力学并不相同。

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