Chhabra Swapnil R, Shockley Keith R, Ward Donald E, Kelly Robert M
Department of Chemical Engineering, North Carolina State University, Stinson Drive, Raleigh, NC 27695-7905, USA.
Appl Environ Microbiol. 2002 Feb;68(2):545-54. doi: 10.1128/AEM.68.2.545-554.2002.
The genome sequence of the hyperthermophilic bacterium Thermotoga maritima encodes a number of glycosyl hydrolases. Many of these enzymes have been shown in vitro to degrade specific glycosides that presumably serve as carbon and energy sources for the organism. However, because of the broad substrate specificity of many glycosyl hydrolases, it is difficult to determine the physiological substrate preferences for specific enzymes from biochemical information. In this study, T. maritima was grown on a range of polysaccharides, including barley beta-glucan, carboxymethyl cellulose, carob galactomannan, konjac glucomannan, and potato starch. In all cases, significant growth was observed, and cell densities reached 10(9) cells/ml. Northern blot analyses revealed different substrate-dependent expression patterns for genes encoding the various endo-acting beta-glycosidases; these patterns ranged from strong expression to no expression under the conditions tested. For example, cel74 (TM0305), a gene encoding a putative beta-specific endoglucananse, was strongly expressed on all substrates tested, including starch, while no evidence of expression was observed on any substrate for lam16 (TM0024), xyl10A (TM0061), xyl10B (TM0070), and cel12A (TM1524), which are genes that encode a laminarinase, two xylanases, and an endoglucanase, respectively. The cel12B (TM1525) gene, which encodes an endoglucanase, was expressed only on carboxymethyl cellulose. An extracellular mannanase encoded by man5 (TM1227) was expressed on carob galactomannan and konjac glucomannan and to a lesser extent on carboxymethyl cellulose. An unexpected result was the finding that the cel5A (TM1751) and cel5B (TM1752) genes, which encode putative intracellular beta-specific endoglucanases, were induced only when T. maritima was grown on konjac glucomannan. To investigate the biochemical basis of this finding, the recombinant forms of Man5 (M(r), 76,900) and Cel5A (M(r), 37,400) were expressed in Escherichia coli and characterized. Man5, a T. maritima extracellular enzyme, had a melting temperature of 99 degrees C and an optimun temperature of 90 degrees C, compared to 90 and 80 degrees C, respectively, for the intracellular enzyme Cel5A. While Man5 hydrolyzed both galactomannan and glucomannan, no activity was detected on glucans or xylans. Cel5A, however, not only hydrolyzed barley beta-glucan, carboxymethyl cellulose, xyloglucan, and lichenin but also had activity comparable to that of Man5 on galactomannan and higher activity than Man5 on glucomannan. The biochemical characteristics of Cel5A, the fact that Cel5A was induced only when T. maritima was grown on glucomannan, and the intracellular localization of Cel5A suggest that the physiological role of this enzyme includes hydrolysis of glucomannan oligosaccharides that are transported following initial hydrolysis by extracellular glycosidases, such as Man5.
嗜热栖热菌(Thermotoga maritima)的基因组序列编码了多种糖基水解酶。其中许多酶在体外已被证明能降解特定的糖苷,这些糖苷可能是该生物体的碳源和能源。然而,由于许多糖基水解酶具有广泛的底物特异性,很难从生化信息中确定特定酶的生理底物偏好。在本研究中,嗜热栖热菌在一系列多糖上生长,包括大麦β-葡聚糖、羧甲基纤维素、角豆半乳甘露聚糖、魔芋葡甘露聚糖和马铃薯淀粉。在所有情况下,均观察到显著生长,细胞密度达到10⁹个细胞/毫升。Northern印迹分析揭示了编码各种内切β-糖苷酶的基因具有不同的底物依赖性表达模式;在测试条件下,这些模式从强表达到无表达不等。例如,cel74(TM0305)基因编码一种假定的β-特异性内切葡聚糖酶,在所有测试底物(包括淀粉)上均强烈表达,而对于lam16(TM0024)、xyl10A(TM0061)、xyl10B(TM0070)和cel12A(TM1524)基因,在任何底物上均未观察到表达证据,这些基因分别编码一种海带多糖酶、两种木聚糖酶和一种内切葡聚糖酶。编码内切葡聚糖酶的cel12B(TM1525)基因仅在羧甲基纤维素上表达。由man5(TM1227)编码的一种胞外甘露聚糖酶在角豆半乳甘露聚糖和魔芋葡甘露聚糖上表达,在羧甲基纤维素上的表达程度较低。一个意外的结果是发现,编码假定的细胞内β-特异性内切葡聚糖酶的cel5A(TM1751)和cel5B(TM1752)基因仅在嗜热栖热菌在魔芋葡甘露聚糖上生长时被诱导。为了研究这一发现的生化基础,Man5(相对分子质量76,900)和Cel5A(相对分子质量37,400)的重组形式在大肠杆菌中表达并进行了特性分析。嗜热栖热菌的胞外酶Man5的解链温度为99℃,最适温度为90℃,而细胞内酶Cel5A的解链温度和最适温度分别为90℃和80℃。虽然Man5能水解半乳甘露聚糖和葡甘露聚糖,但在葡聚糖或木聚糖上未检测到活性。然而,Cel5A不仅能水解大麦β-葡聚糖、羧甲基纤维素、木葡聚糖和地衣多糖,而且在半乳甘露聚糖上的活性与Man5相当,在葡甘露聚糖上的活性比Man5高。Cel5A的生化特性、Cel5A仅在嗜热栖热菌在葡甘露聚糖上生长时被诱导这一事实以及Cel5A的细胞内定位表明,这种酶的生理作用包括水解葡甘露聚糖寡糖,这些寡糖是在胞外糖苷酶(如Man5)初步水解后被转运的。