Frishman Dmitrij, Kaps Andreas, Mewes Hans-Werner
Institute for Bioinformatics, GSF - National Research Center for Environment and Heatlh, Ingolstädter Landstrasse 1, 85764 Neueherberg, Germany.
Pharmacogenomics. 2002 Mar;3(2):265-71. doi: 10.1517/14622416.3.2.265.
The review begins by providing a brief typology of biological databases on the Internet, illustrated by examples of the most influential resources of each kind. We then take an insider look at one typical on-line genomic resource -- the yeast genome database hosted at the Munich Information Center for Protein Sequences (MIPS) -- and explain how and why it has evolved from a basic sequence repository to a multidomain knowledge base. The role of community efforts in curating and annotating genome data is discussed. The crucial role of data integration and interoperability in developing next-generation genomic facilities is underscored.
本综述首先简要介绍互联网上生物数据库的类型,并列举每种类型中最具影响力的资源实例进行说明。接着,我们深入了解一个典型的在线基因组资源——位于慕尼黑蛋白质序列信息中心(MIPS)的酵母基因组数据库,解释它是如何以及为何从一个基本的序列储存库演变为一个多领域知识库的。文中还讨论了社区力量在整理和注释基因组数据方面所发挥的作用。强调了数据整合与互操作性在开发下一代基因组设施中的关键作用。