Gal Micaela, Preston Gail M, Massey Ruth C, Spiers Andrew J, Rainey Paul B
Department of Plant Sciences, University of Oxford, South Parks Road, Oxford, OX1 3RB, UK.
Mol Ecol. 2003 Nov;12(11):3109-21. doi: 10.1046/j.1365-294x.2003.01953.x.
Pseudomonas fluorescens SBW25 is a Gram-negative bacterium that grows in close association with plants. In common with a broad range of functionally similar bacteria it plays an important role in the turnover of organic matter and certain isolates can promote plant growth. Despite its environmental significance, the causes of its ecological success are poorly understood. Here we describe the development and application of a simple promoter trapping strategy (IVET) to identify P. fluorescens SBW25 genes showing elevated levels of expression in the sugar beet rhizosphere. A total of 25 rhizosphere-induced (rhi) fusions are reported with predicted roles in nutrient acquisition, stress responses, biosynthesis of phytohormones and antibiotics. One rhi fusion is to wss, an operon encoding an acetylated cellulose polymer. A mutant carrying a defective wss locus was competitively compromised (relative to the wild type) in the rhizosphere and in the phyllosphere, but not in bulk soil. The rhizosphere-induced wss locus therefore contributes to the ecological performance of SBW25 in the plant environment and supports our conjecture that genes inactive in the laboratory environment, but active in the wild, are likely to be determinants of fitness in natural environments.
荧光假单胞菌SBW25是一种革兰氏阴性菌,与植物密切共生。与许多功能相似的细菌一样,它在有机物周转中发挥着重要作用,某些菌株能够促进植物生长。尽管其具有环境意义,但其生态成功的原因却知之甚少。在此,我们描述了一种简单的启动子捕获策略(体内表达技术,IVET)的开发与应用,以鉴定在甜菜根际中表达水平升高的荧光假单胞菌SBW25基因。共报道了25个根际诱导(rhi)融合基因,它们在养分获取、应激反应、植物激素和抗生素生物合成中具有预测功能。一个rhi融合基因与wss相关,wss是一个编码乙酰化纤维素聚合物的操纵子。携带缺陷型wss基因座的突变体在根际和叶际中(相对于野生型)竞争力受损,但在土壤中不受影响。因此,根际诱导的wss基因座有助于SBW25在植物环境中的生态表现,并支持我们的推测,即在实验室环境中无活性但在自然环境中有活性的基因可能是自然环境中适应性的决定因素。