Nandhagopal Narayanasamy, Simpson Alan A, Johnson Marc C, Francisco Adam B, Schatz Gisela W, Rossmann Michael G, Vogt Volker M
Department of Biological Sciences, Lilly Hall, Purdue University, 915 W. State Street, West Lafayette, IN 47907-2054, USA.
J Mol Biol. 2004 Jan 2;335(1):275-82. doi: 10.1016/j.jmb.2003.10.034.
The structure of the N-terminal domain (NTD) of Rous sarcoma virus (RSV) capsid protein (CA), with an upstream 25 amino acid residue extension corresponding to the C-terminal portion of the Gag p10 protein, has been determined by X-ray crystallography. Purified Gag proteins of retroviruses can assemble in vitro into virus-like particles closely resembling in vivo-assembled immature virus particles, but without a membrane. When the 25 amino acid residues upstream of CA are deleted, Gag assembles into tubular particles. The same phenotype is observed in vivo. Thus, these residues act as a "shape determinant" promoting spherical assembly, when they are present, or tubular assembly, when they are absent. We show that, unlike the NTD on its own, the extended NTD protein has no beta-hairpin loop at the N terminus of CA and that the molecule forms a dimer in which the amino-terminal extension forms the interface between monomers. Since dimerization of Gag has been inferred to be a critical step in assembly of spherical, immature Gag particles, the dimer interface may represent a structural feature that is essential in retrovirus assembly.
劳氏肉瘤病毒(RSV)衣壳蛋白(CA)N端结构域(NTD)的结构已通过X射线晶体学确定,该结构带有一个对应于Gag p10蛋白C端部分的上游25个氨基酸残基延伸。逆转录病毒的纯化Gag蛋白可在体外组装成与体内组装的未成熟病毒颗粒极为相似的病毒样颗粒,但没有膜。当CA上游的25个氨基酸残基被删除时,Gag组装成管状颗粒。在体内也观察到相同的表型。因此,当这些残基存在时,它们作为“形状决定因素”促进球形组装;当它们不存在时,则促进管状组装。我们发现,与单独的NTD不同,延伸的NTD蛋白在CA的N端没有β-发夹环,并且该分子形成二聚体,其中氨基末端延伸形成单体之间的界面。由于Gag的二聚化被推断为球形未成熟Gag颗粒组装的关键步骤,二聚体界面可能代表逆转录病毒组装中必不可少的结构特征。