Suppr超能文献

异生素降解鞘氨醇单胞菌菌株中共轭降解性质粒的检测与特性分析

Detection and characterization of conjugative degradative plasmids in xenobiotic-degrading Sphingomonas strains.

作者信息

Basta Tamara, Keck Andreas, Klein Joachim, Stolz Andreas

机构信息

Institut für Mikrobiologie, Universität Stuttgart, Allmandring 31, D-70569 Stuttgart, Germany.

出版信息

J Bacteriol. 2004 Jun;186(12):3862-72. doi: 10.1128/JB.186.12.3862-3872.2004.

Abstract

A systematic survey for the presence of plasmids in 17 different xenobiotic-degrading Sphingomonas strains was performed. In almost all analyzed strains, two to five plasmids with sizes of about 50 to 500 kb were detected by using pulsed-field gel electrophoresis. A comparison of plasmid preparations untreated or treated with S1 nuclease suggested that, in general, Sphingomonas plasmids are circular. Hybridization experiments with labeled gene probes suggested that large plasmids are involved in the degradation of dibenzo-p-dioxin, dibenzofuran, and naphthalenesulfonates in S. wittichii RW1, Sphingomonas sp. HH69, and S. xenophaga BN6, respectively. The plasmids which are responsible for the degradation of naphthalene, biphenyl, and toluene by S. aromaticivorans F199 (pNL1) and of naphthalenesulfonates by S. xenophaga BN6 (pBN6) were site-specifically labeled with a kanamycin resistance cassette. The conjugative transfer of these labeled plasmids was attempted with various bacterial strains as putative recipient strains. Thus, a conjugative transfer of plasmid pBN6 from S. xenophaga BN6 to a cured mutant of strain BN6 and to Sphingomonas sp. SS3 was observed. The conjugation experiments with plasmid pNL1 suggested a broader host range of this plasmid, because it was transferred without any obvious structural changes to S. yanoikuyae B1, Sphingomonas sp. SS3, and S. herbicidovorans. In contrast, major plasmid rearrangements were observed in the transconjugants after the transfer of plasmid pNL1 to Sphingomonas sp. HH69 and of pBN6 to Sphingomonas sp. SS3. No indications for the transfer of a Sphingomonas plasmid to bacteria outside of the Sphingomonadaceae were obtained.

摘要

对17种不同的降解异生物质的鞘氨醇单胞菌菌株进行了质粒存在情况的系统调查。通过脉冲场凝胶电泳,在几乎所有分析的菌株中都检测到了两到五个大小约为50至500 kb的质粒。对未经处理或用S1核酸酶处理的质粒制备物进行比较表明,一般来说,鞘氨醇单胞菌质粒是环状的。用标记的基因探针进行的杂交实验表明,大质粒分别参与了维氏鞘氨醇单胞菌RW1、鞘氨醇单胞菌属HH69和食异鞘氨醇单胞菌BN6中对二苯并 - 对 - 二恶英、二苯并呋喃和萘磺酸盐的降解。负责芳香鞘氨醇单胞菌F199(pNL1)降解萘、联苯和甲苯以及食异鞘氨醇单胞菌BN6(pBN6)降解萘磺酸盐的质粒用卡那霉素抗性盒进行了位点特异性标记。尝试将这些标记质粒与各种细菌菌株作为假定的受体菌株进行接合转移。因此,观察到质粒pBN6从食异鞘氨醇单胞菌BN6接合转移到菌株BN6的 cured 突变体和鞘氨醇单胞菌属SS3。用质粒pNL1进行的接合实验表明该质粒具有更广泛的宿主范围,因为它在没有任何明显结构变化的情况下转移到了矢野鞘氨醇单胞菌B1、鞘氨醇单胞菌属SS3和除草剂鞘氨醇单胞菌。相反,在质粒pNL1转移到鞘氨醇单胞菌属HH69以及pBN6转移到鞘氨醇单胞菌属SS3后,在接合子中观察到了主要的质粒重排。未获得鞘氨醇单胞菌质粒转移到鞘氨醇单胞菌科以外细菌的迹象。

相似文献

1
Detection and characterization of conjugative degradative plasmids in xenobiotic-degrading Sphingomonas strains.
J Bacteriol. 2004 Jun;186(12):3862-72. doi: 10.1128/JB.186.12.3862-3872.2004.
3
Identification and functional analysis of the genes for naphthalenesulfonate catabolism by Sphingomonas xenophaga BN6.
Microbiology (Reading). 2006 Jul;152(Pt 7):1929-1940. doi: 10.1099/mic.0.28783-0.
4
The Sphingomonas plasmid pCAR3 is involved in complete mineralization of carbazole.
J Bacteriol. 2007 Mar;189(5):2007-20. doi: 10.1128/JB.01486-06. Epub 2006 Dec 15.
5
Physiological and genetic comparison of two aromatic hydrocarbon-degrading Sphingomonas strains.
Mol Cells. 2000 Apr 30;10(2):199-205. doi: 10.1007/s10059-000-0199-x.
7
Molecular characteristics of xenobiotic-degrading sphingomonads.
Appl Microbiol Biotechnol. 2009 Jan;81(5):793-811. doi: 10.1007/s00253-008-1752-3. Epub 2008 Nov 11.
8
Isolation and genomic characterization of the ibuprofen-degrading bacterium Sphingomonas strain MPO218.
Environ Microbiol. 2021 Jan;23(1):267-280. doi: 10.1111/1462-2920.15309. Epub 2020 Nov 27.

引用本文的文献

2
An improved genome editing system for Sphingomonadaceae.
Access Microbiol. 2024 May 13;6(5). doi: 10.1099/acmi.0.000755.v3. eCollection 2024.
4
The variations of native plasmids greatly affect the cell surface hydrophobicity of sphingomonads.
mSystems. 2023 Dec 21;8(6):e0086223. doi: 10.1128/msystems.00862-23. Epub 2023 Nov 1.
5
Dissecting the HGT network of carbon metabolic genes in soil-borne microbiota.
Front Microbiol. 2023 Jul 7;14:1173748. doi: 10.3389/fmicb.2023.1173748. eCollection 2023.
6
Integration of Transcriptomics and Microbiomics Reveals the Responses of to Toxic Cyanobacteria.
Toxins (Basel). 2023 Feb 1;15(2):119. doi: 10.3390/toxins15020119.
9
Polyphasic characterization of four soil-derived phenanthrene-degrading Acidovorax strains and proposal of Acidovorax carolinensis sp. nov.
Syst Appl Microbiol. 2018 Sep;41(5):460-472. doi: 10.1016/j.syapm.2018.06.001. Epub 2018 Jun 8.

本文引用的文献

1
Aromatic hydrocarbon degradation by Sphingomonas yanoikuyae B1.
J Ind Microbiol Biotechnol. 1997 Nov-Dec;19(5-6):408-14. doi: 10.1038/sj.jim.2900475.
4
Complete sequence of the IncP-9 TOL plasmid pWW0 from Pseudomonas putida.
Environ Microbiol. 2002 Dec;4(12):856-71. doi: 10.1046/j.1462-2920.2002.00305.x.
6
Evidence for natural horizontal transfer of the pcpB gene in the evolution of polychlorophenol-degrading sphingomonads.
Appl Environ Microbiol. 2002 Sep;68(9):4495-501. doi: 10.1128/AEM.68.9.4495-4501.2002.
8
Organization and regulation of pentachlorophenol-degrading genes in Sphingobium chlorophenolicum ATCC 39723.
J Bacteriol. 2002 Sep;184(17):4672-80. doi: 10.1128/JB.184.17.4672-4680.2002.
10
Characterization of Sphingomonas sp. Ant 17, an aromatic hydrocarbon-degrading bacterium isolated from Antarctic soil.
Microb Ecol. 2002 Jan;43(1):44-54. doi: 10.1007/s00248-001-1019-3. Epub 2002 Jan 23.

文献AI研究员

20分钟写一篇综述,助力文献阅读效率提升50倍。

立即体验

用中文搜PubMed

大模型驱动的PubMed中文搜索引擎

马上搜索

文档翻译

学术文献翻译模型,支持多种主流文档格式。

立即体验