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无结合GTP酶的Dbs的DH/PH片段的晶体结构。

Crystal structure of the DH/PH fragment of Dbs without bound GTPase.

作者信息

Worthylake David K, Rossman Kent L, Sondek John

机构信息

Department of Pharmacology, University of North Carolina School of Medicine, Chapel Hill, NC 27599, USA.

出版信息

Structure. 2004 Jun;12(6):1078-86. doi: 10.1016/j.str.2004.03.021.

Abstract

Dbl proteins are guanine nucleotide exchange factors for Rho GTPases, containing adjacent Dbl homology (DH) and pleckstrin homology (PH) domains. This domain architecture is virtually invariant and typically required for full exchange potential. Several structures of DH/PH fragments bound to GTPases implicate the PH domain in nucleotide exchange. To more fully understand the functional linkage between DH and PH domains, we have determined the crystal structure of the DH/PH fragment of Dbs without bound GTPase. This structure is generally similar to previously determined structures of Dbs bound to GTPases albeit with greater apparent mobility between the DH and PH domains. These comparisons suggest that the DH and PH domains of Dbs are spatially primed for binding GTPases and small alterations in intradomain conformations that may be elicited by subtle biological responses, such as altered phosphoinositide levels, are sufficient to enhance exchange by facilitating interactions between the PH domain and GTPases.

摘要

Dbl蛋白是Rho GTP酶的鸟嘌呤核苷酸交换因子,包含相邻的Dbl同源结构域(DH)和普列克底物蛋白同源结构域(PH)。这种结构域架构几乎是不变的,通常是实现完全交换潜能所必需的。几种与GTP酶结合的DH/PH片段结构表明,PH结构域参与核苷酸交换。为了更全面地理解DH和PH结构域之间的功能联系,我们确定了未结合GTP酶的Dbs的DH/PH片段的晶体结构。该结构总体上与先前确定的与GTP酶结合的Dbs结构相似,尽管DH和PH结构域之间的表观移动性更大。这些比较表明,Dbs的DH和PH结构域在空间上已准备好结合GTP酶,而由微妙的生物学反应(如改变的磷酸肌醇水平)引发的结构域内构象的微小变化,足以通过促进PH结构域与GTP酶之间的相互作用来增强交换。

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