Suppr超能文献

分辨率为1.3埃的单斜晶系火鸡卵溶菌酶的X射线结构。

X-ray structure of monoclinic turkey egg lysozyme at 1.3 A resolution.

作者信息

Harata K

机构信息

Biomolecules Department, National Institute of Bioscience and Human Technology, Tsukuba, Ibaraki, Japan.

出版信息

Acta Crystallogr D Biol Crystallogr. 1993 Sep 1;49(Pt 5):497-504. doi: 10.1107/S0907444993005542.

Abstract

Monoclinic crystals of turkey egg lysozyme (TEL, E.C. 3.2.1.17) were obtained from 2.2 M ammonium sulfate solution at pH 4.2. They belong to space group P2(1) with unit-cell dimensions a = 38.07, b = 33.20, c = 46.12 A and beta = 110.1 degrees, and contain one molecule in the asymmetric unit (V(m) = 1.91 A(3) Da(-1)). The three-dimensional structure of TEL was solved by the method of multiple isomorphous replacement with anomalous scattering. Area detector data to 1.5 A resolution from native and heavy-atom derivatives were used for the structure determination. The structure was refined by the simulated-annealing method with diffraction data of 10-1.30 A resolution. The conventional R factor was 0.189. The root-mean-square deviations from ideal bond distances and angles were 0.016 A and 2.9 degrees, respectively. The backbone structure of TEL is very similar to that of hen egg lysozyme (HEL) and the difference in seven amino-acid residues does not affect the basic folding of the polypeptide chain. Except for the region from Gly101 to Gly104, the geometry of the active-site cleft is conserved between TEL and HEL. The Gly101 residue is located at the end of the sugar-binding site and the structural change in this region between TEL and HEL is considered to be responsible for the difference in their enzymatic properties.

摘要

火鸡卵溶菌酶(TEL,E.C. 3.2.1.17)的单斜晶体是从pH 4.2的2.2 M硫酸铵溶液中获得的。它们属于空间群P2(1),晶胞参数为a = 38.07、b = 33.20、c = 46.12 Å,β = 110.1°,不对称单元中含有一个分子(V(m) = 1.91 ų Da⁻¹)。TEL的三维结构通过多重同晶置换加反常散射的方法解析。使用天然晶体和重原子衍生物至1.5 Å分辨率的面探测器数据进行结构测定。结构通过模拟退火方法用10 - 1.30 Å分辨率的衍射数据进行精修。传统R因子为0.189。与理想键长和键角的均方根偏差分别为0.016 Å和2.9°。TEL的主链结构与鸡卵溶菌酶(HEL)非常相似,七个氨基酸残基的差异并不影响多肽链的基本折叠。除了从Gly101到Gly104的区域外,TEL和HEL活性位点裂隙的几何结构是保守的。Gly101残基位于糖结合位点的末端,TEL和HEL在该区域的结构变化被认为是它们酶学性质差异的原因。

文献AI研究员

20分钟写一篇综述,助力文献阅读效率提升50倍。

立即体验

用中文搜PubMed

大模型驱动的PubMed中文搜索引擎

马上搜索

文档翻译

学术文献翻译模型,支持多种主流文档格式。

立即体验