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细菌草酸转运蛋白OxlT的结构与转运机制

Structure and transport mechanism of the bacterial oxalate transporter OxlT.

作者信息

Hirai Teruhisa, Subramaniam Sriram

机构信息

Laboratory of Cell Biology, Center for Cancer Research, National Cancer Institute, National Institutes of Health, Bethesda, Maryland 20892, USA.

出版信息

Biophys J. 2004 Nov;87(5):3600-7. doi: 10.1529/biophysj.104.049320. Epub 2004 Aug 31.

Abstract

Membrane proteins that belong to the major facilitator superfamily (MFS) are found in organisms across the evolutionary spectrum and mediate the transport of a variety of substrates ranging from small metabolites to neurotransmitters. The oxalate transporter (OxlT) is a representative MFS protein, and exchanges formate for oxalate across the cytoplasmic membrane of the organism Oxalobacter formigenes. Here, we present a structural model for the protein conformational changes that occur during oxalate transport by combining a three-dimensional map of the oxalate-bound, "closed" state of OxlT at 6.5 A determined by cryo-electron microscopy with a model of the "open" state of OxlT based on the atomic structures of the related transporters, glycerol-3-phosphate transporter (GlpT) and lactose permease (LacY). We demonstrate that the principal structural change associated with substrate transport is a concerted rocking movement of the two structurally similar halves of the protein relative to each other. Our structural model places two positively charged residues, Arg-272 and Lys-355 in the central cavity, suggesting that electrostatic interactions between these residues and the oxalate anion is a key step in generating the conformational change between the open and closed states of the transporter.

摘要

属于主要易化子超家族(MFS)的膜蛋白存在于整个进化谱系的生物体中,介导从小代谢物到神经递质等多种底物的运输。草酸盐转运蛋白(OxlT)是一种典型的MFS蛋白,可在产甲酸草酸杆菌的细胞质膜上以甲酸盐交换草酸盐。在此,我们通过将冷冻电子显微镜确定的6.5埃分辨率下草酸盐结合的OxlT“关闭”状态的三维图谱与基于相关转运蛋白甘油-3-磷酸转运蛋白(GlpT)和乳糖通透酶(LacY)的原子结构构建的OxlT“开放”状态模型相结合,提出了草酸盐运输过程中发生的蛋白质构象变化的结构模型。我们证明,与底物运输相关的主要结构变化是蛋白质两个结构相似的部分相对于彼此的协同摇摆运动。我们的结构模型在中央腔中放置了两个带正电荷的残基,即Arg-272和Lys-355,这表明这些残基与草酸盐阴离子之间的静电相互作用是产生转运蛋白开放和关闭状态之间构象变化的关键步骤。

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本文引用的文献

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