tPatternHunter：带缺口的、快速且灵敏的翻译同源性搜索。
tPatternHunter: gapped, fast and sensitive translated homology search.
作者信息
Kisman Derek, Li Ming, Ma Bin, Wang Li
机构信息
Bioinformatics Solutions Inc. 145 Columbia St West, Waterloo, Ontario, Canada N2L 3L2.
出版信息
Bioinformatics. 2005 Feb 15;21(4):542-4. doi: 10.1093/bioinformatics/bti035. Epub 2004 Sep 16.
Abstract
UNLABELLED
New ideas, spaced seeds and gapped alignment before 6-frame translation are implemented for translated homology search in tPatternHunter. The new software compares favorably with tBLASTx.
AVAILABILITY
The software is free to academics at http://www.bioinformaticssolutions.com/downloads/ph-academic/
CONTACT
摘要
未标注
在tPatternHunter中进行翻译同源性搜索时，实现了新的思路、间隔种子和六框架翻译前的间隔比对。新软件与tBLASTx相比具有优势。
可用性
该软件可供学术界人士从http://www.bioinformaticssolutions.com/downloads/ph-academic/免费下载。
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