Yang Wei Yuan, Gruebele Martin
Center for Biophysics and Computational Biology and Department of Chemistry, University of Illinois at Urbana-Champaign, Illinois 61801, USA.
Biochemistry. 2004 Oct 19;43(41):13018-25. doi: 10.1021/bi049113b.
Two classes of lambda(6-85) mutants (those richer in alanine, and those richer in glycine) have very similar slopes in an Arrhenius plot of the unfolding rates but very different temperature dependencies of the folding rates. Temperature-dependent interactions (e.g., hydrophobicity) play a large role in the initial stages of folding but not in the initial stages of unfolding of lambda(6-85). Placement of the transition state in terms of its surface exposure and entropy shows that at least two reaction coordinates are required to describe folding of all mutants over the full temperature range. The unusual Arrhenius plots of the very fastest mutant provide an additional kinetic signature for downhill folding.
两类λ(6 - 85)突变体(一类富含丙氨酸,另一类富含甘氨酸)在解折叠速率的阿伦尼乌斯图中具有非常相似的斜率,但折叠速率的温度依赖性却大不相同。温度依赖性相互作用(例如疏水性)在λ(6 - 85)折叠的初始阶段起很大作用,但在解折叠的初始阶段不起作用。根据过渡态的表面暴露和熵来确定其位置表明,在整个温度范围内描述所有突变体的折叠至少需要两个反应坐标。速度非常快的突变体的异常阿伦尼乌斯图为下坡折叠提供了额外的动力学特征。