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集胞藻铁氧化还原蛋白/铁氧化还原蛋白-NADP(+)-还原酶/NADP+复合物:通过核磁共振约束对接获得的结构模型。

Synechocystis ferredoxin/ferredoxin-NADP(+)-reductase/NADP+ complex: Structural model obtained by NMR-restrained docking.

作者信息

Palma P Nuno, Lagoutte Bernard, Krippahl Ludwig, Moura José J G, Guerlesquin Françoise

机构信息

REQUIMTE, Departamento de Química, Faculdade de Ciências e Tecnologia, Universidade Nova de Lisboa, 2859-516 Caparica, Portugal.

出版信息

FEBS Lett. 2005 Aug 29;579(21):4585-90. doi: 10.1016/j.febslet.2005.07.027.

Abstract

Ferredoxin (Fd) and ferredoxin-NADP(+)-reductase (FNR) are two terminal physiological partners of the photosynthetic electron transport chain. Based on a nuclear magnetic resonance (NMR)-restrained-docking approach, two alternative structural models of the Fd-FNR complex in the presence of NADP+ are proposed. The protein docking simulations were performed with the software BiGGER. NMR titration revealed a 1:1 stoichiometry for the complex and allowed the mapping of the interacting residues at the surface of Fd. The NMR chemical shifts were encoded into distance constraints and used with theoretically calculated electronic coupling between the redox cofactors to propose experimentally validated docked complexes.

摘要

铁氧化还原蛋白(Fd)和铁氧化还原蛋白-NADP(+)-还原酶(FNR)是光合电子传递链的两个末端生理伙伴。基于核磁共振(NMR)约束对接方法,提出了在存在NADP+的情况下Fd-FNR复合物的两种替代结构模型。使用软件BiGGER进行了蛋白质对接模拟。NMR滴定揭示了复合物的1:1化学计量比,并允许绘制Fd表面相互作用残基的图谱。NMR化学位移被编码为距离约束,并与氧化还原辅因子之间的理论计算电子耦合一起用于提出经实验验证的对接复合物。

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