Shulgin Ivan L, Ruckenstein Eli
Department of Chemical & Biological Engineering, State University of New York at Buffalo, Amherst, New York 14260, USA.
J Chem Phys. 2005 Aug 1;123(5):054909. doi: 10.1063/1.2011388.
In the present paper a procedure to calculate the properties of proteins in aqueous mixed solvents, particularly the excesses of the constituents of the mixed solvent near the protein molecule and the preferential binding parameters, is suggested. Expressions for the Kirkwood-Buff integrals in ternary mixtures and for the preferential binding parameter were derived and used to calculate various properties of infinitely dilute proteins in aqueous mixed solvents. The derived expressions and experimental information regarding the partial molar volumes and the preferential binding parameters were used to calculate the excesses (deficits) of water and cosolvent (in comparison with the bulk concentrations of protein-free mixed solvent) in the vicinity of ribonuclease A, ribonuclease T1, and lysozyme molecules. The calculations showed that water was in excess in the vicinity of ribonuclease A for water/glycerol and water/trehalose mixtures, and the cosolvent urea was in excess in the vicinity of ribonuclease T1 and lysozyme. The derivative of the activity coefficient of the protein with respect to the mole fraction of water was also calculated. This derivative was negative for the water/glycerol and water/trehalose mixed solvents and positive for the water/urea mixture. The mixture of lysozyme in the water/urea solvent is of particular interest, because the lysozyme at pH 7.0 is in its native state up to 9.3M urea, while at pH 2.0 it is denaturated between 2.5 and 5M and higher concentrations of urea. Our results demonstrated a striking similarity in the hydration of lysozyme at both pHs. It is worthwhile to note that the excesses of urea were only weakly composition dependent on both cases.
本文提出了一种计算蛋白质在水性混合溶剂中性质的方法,特别是混合溶剂成分在蛋白质分子附近的过量情况以及优先结合参数。推导了三元混合物中柯克伍德 - 布夫积分和优先结合参数的表达式,并用于计算无限稀释蛋白质在水性混合溶剂中的各种性质。利用推导的表达式以及关于偏摩尔体积和优先结合参数的实验信息,计算了核糖核酸酶A、核糖核酸酶T1和溶菌酶分子附近水和助溶剂的过量(不足)情况(与无蛋白质混合溶剂的本体浓度相比)。计算结果表明,在水/甘油和水/海藻糖混合物中,核糖核酸酶A附近水过量;在核糖核酸酶T1和溶菌酶附近,助溶剂尿素过量。还计算了蛋白质活度系数相对于水摩尔分数的导数。该导数在水/甘油和水/海藻糖混合溶剂中为负,在水/尿素混合物中为正。溶菌酶在水/尿素溶剂中的混合物特别令人感兴趣,因为在pH 7.0时,溶菌酶在高达9.3M尿素的情况下处于天然状态,而在pH 2.0时,它在2.5至5M及更高浓度的尿素中会变性。我们的结果表明,在这两种pH值下,溶菌酶的水合作用具有显著的相似性。值得注意的是,在这两种情况下,尿素的过量仅对组成有微弱的依赖性。