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挖掘基因组和“宏基因组”以寻找新型催化剂。

Mining genomes and 'metagenomes' for novel catalysts.

作者信息

Ferrer Manuel, Martínez-Abarca Francisco, Golyshin Peter N

机构信息

Department of Biocatalysis, Institute of Catalysis, CSIC, Cantoblanco, Madrid, Spain.

出版信息

Curr Opin Biotechnol. 2005 Dec;16(6):588-93. doi: 10.1016/j.copbio.2005.09.001. Epub 2005 Sep 19.

Abstract

Advances in the field of genomics and 'metagenomics' have dramatically revised our view of microbial biodiversity and its potential for biotechnological applications. Considering the estimation that >99% of microorganisms in most environments are not amenable to culturing, very little is known about their genomes, genes and encoded enzymatic activities. The isolation, archiving and analysis of environmental DNA (or so-called 'metagenomes') has enabled us to mine microbial diversity, allowing us to access their genomes, identify protein coding sequences and even to reconstruct biochemical pathways, providing insights into the properties and functions of these organisms. The generation and analysis of (meta)genomic libraries is thus a powerful approach to harvest and archive environmental genetic resources. It will enable us to identify which organisms are present, what they do, and how their genetic information can be beneficial to mankind.

摘要

基因组学和“宏基因组学”领域的进展极大地改变了我们对微生物多样性及其生物技术应用潜力的看法。鉴于据估计大多数环境中>99%的微生物无法培养,我们对它们的基因组、基因和编码的酶活性知之甚少。环境DNA(或所谓的“宏基因组”)的分离、存档和分析使我们能够挖掘微生物多样性,使我们能够获取它们的基因组,识别蛋白质编码序列,甚至重建生化途径,从而深入了解这些生物体的特性和功能。因此,(宏)基因组文库的构建和分析是获取和存档环境遗传资源的有力方法。它将使我们能够确定存在哪些生物体、它们的功能以及它们的遗传信息如何造福人类。

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