Skidmore Mark, Anderson Suzanne P, Sharp Martin, Foght Julia, Lanoil Brian D
Department of Environmental Sciences, 2217 Geology Building, University of California, Riverside, CA 92521, USA.
Appl Environ Microbiol. 2005 Nov;71(11):6986-97. doi: 10.1128/AEM.71.11.6986-6997.2005.
Viable microbes have been detected beneath several geographically distant glaciers underlain by different lithologies, but comparisons of their microbial communities have not previously been made. This study compared the microbial community compositions of samples from two glaciers overlying differing bedrock. Bulk meltwater chemistry indicates that sulfide oxidation and carbonate dissolution account for 90% of the solute flux from Bench Glacier, Alaska, whereas gypsum/anhydrite and carbonate dissolution accounts for the majority of the flux from John Evans Glacier, Ellesmere Island, Nunavut, Canada. The microbial communities were examined using two techniques: clone libraries and dot blot hybridization of 16S rRNA genes. Two hundred twenty-seven clones containing amplified 16S rRNA genes were prepared from subglacial samples, and the gene sequences were analyzed phylogenetically. Although some phylogenetic groups, including the Betaproteobacteria, were abundant in clone libraries from both glaciers, other well-represented groups were found at only one glacier. Group-specific oligonucleotide probes were developed for two phylogenetic clusters that were of particular interest because of their abundance or inferred biochemical capabilities. These probes were used in quantitative dot blot hybridization assays with a range of samples from the two glaciers. In addition to shared phyla at both glaciers, each glacier also harbored a subglacial microbial population that correlated with the observed aqueous geochemistry. These results are consistent with the hypothesis that microbial activity is an important contributor to the solute flux from glaciers.
在由不同岩性构成的、地理位置相隔甚远的数条冰川之下,已检测到有存活的微生物,但此前尚未对它们的微生物群落进行比较。本研究比较了来自两座覆盖不同基岩的冰川的样本的微生物群落组成。总体融水化学分析表明,硫化物氧化和碳酸盐溶解占阿拉斯加本奇冰川溶质通量的90%,而石膏/硬石膏和碳酸盐溶解则占加拿大努纳武特地区埃尔斯米尔岛约翰·埃文斯冰川通量的大部分。使用两种技术对微生物群落进行了检测:克隆文库和16S rRNA基因的斑点杂交。从冰下样本中制备了227个含有扩增16S rRNA基因的克隆,并对基因序列进行了系统发育分析。尽管包括β-变形菌纲在内的一些系统发育类群在两座冰川的克隆文库中都很丰富,但其他有代表性的类群仅在一座冰川中被发现。针对两个因其丰度或推测的生化能力而特别受关注的系统发育簇,开发了组特异性寡核苷酸探针。这些探针用于对来自两座冰川的一系列样本进行定量斑点杂交分析。除了两座冰川共有的门类外,每座冰川还拥有一个与观测到的水体地球化学相关的冰下微生物种群。这些结果与以下假设一致,即微生物活动是冰川溶质通量的重要贡献因素。