Kulkarni S A, Zhu J, Blechinger S
Safe Environments Programme, Health Canada, Ottawa, Ontario, Canada.
Xenobiotica. 2005 Oct-Nov;35(10-11):955-73. doi: 10.1080/00498250500354402.
Knowledge about metabolism is very important to understand the health risks posed by chemicals. The biochemical process of metabolism causes activation, inactivation, toxification, detoxification as well as changes in the physicochemical properties of a chemical. The long time consumption and high costs associated with animal tests and the challenges faced by traditional quantitative structure-activity relationship (QSAR) models in dealing with situations wherein parent chemical structures are less relevant to the ultimate effects have led to the development of in silico techniques for the prediction of xenobiotic metabolism. The strengths and limitations of some of the most commonly used in silico expert systems, and their application in studying metabolism of xenobiotic chemicals, have been reviewed. The in silico metabolism simulators possessed several distinguishing features imparted in part by the nature of knowledge rules (algorithms) encoded within them and in part by the integration of QSAR libraries and computational engines.
了解新陈代谢对于理解化学物质所带来的健康风险非常重要。新陈代谢的生化过程会导致化学物质的活化、失活、毒性化、解毒以及其物理化学性质的改变。动物试验耗时长久且成本高昂,同时传统定量构效关系(QSAR)模型在处理母体化学结构与最终效应相关性较低的情况时面临挑战,这些因素促使了用于预测外源性物质代谢的计算机模拟技术的发展。本文综述了一些最常用的计算机模拟专家系统的优缺点,以及它们在研究外源性化学物质代谢中的应用。计算机模拟代谢模拟器具有几个显著特征,部分是由其内部编码的知识规则(算法)的性质赋予的,部分是由QSAR库和计算引擎的整合赋予的。