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禽腺病毒CELO长纤维C末端头部结构域的结晶

Crystallization of the C-terminal head domain of the avian adenovirus CELO long fibre.

作者信息

Guardado Calvo Pablo, Llamas-Saiz Antonio L, Langlois Patrick, van Raaij Mark J

机构信息

Departamento de Bioquímica y Biología Molecular, Facultad de Farmacia, Universidad de Santiago de Compostela, Campus Sur, E-15782 Santiago de Compostela, Spain.

出版信息

Acta Crystallogr Sect F Struct Biol Cryst Commun. 2006 May 1;62(Pt 5):449-52. doi: 10.1107/S1744309106012024. Epub 2006 Apr 12.

Abstract

Avian adenovirus CELO contains two different fibres: fibre 1, the long fibre, and fibre 2, the short fibre. The short fibre is responsible for binding to an unknown avian receptor and is essential for infection of birds. The long fibre is not essential, but is known to bind the coxsackievirus and adenovirus receptor protein. Both trimeric fibres are attached to the same penton base, of which each icosahedral virus contains 12 copies. The short fibre extends straight outwards, while the long fibre emerges at an angle. The carboxy-terminal amino acids 579-793 of the avian adenovirus long fibre have been expressed with an amino-terminal hexahistidine tag and the expressed trimeric protein has been purified by nickel-affinity chromatography and crystallized. Crystals were grown at low pH using PEG 10,000 as precipitant and belonged to space group C2. The crystals diffracted rotating-anode Cu Kalpha radiation to at least 1.9 angstroms resolution and a complete data set was collected from a single crystal to 2.2 angstroms resolution. Unit-cell parameters were a = 216.5, b = 59.2, c = 57.5 angstroms, beta = 101.3 degrees, suggesting one trimer per asymmetric unit and a solvent content of 46%. The long fibre head does not have significant sequence homology to any other protein of known structure and molecular-replacement attempts with known fibre-head structures were unsuccessful. However, a map calculated using SIRAS phasing shows a clear trimer with a shape similar to known adenovirus fibre-head structures. Structure solution is in progress.

摘要

禽腺病毒CELO含有两种不同的纤维:长纤维1和短纤维2。短纤维负责与一种未知的禽类受体结合,是禽类感染所必需的。长纤维不是必需的,但已知它能结合柯萨奇病毒和腺病毒受体蛋白。两种三聚体纤维都连接到同一个五聚体基座上,每个二十面体病毒含有12个五聚体基座拷贝。短纤维直接向外延伸,而长纤维以一定角度伸出。禽腺病毒长纤维的羧基末端氨基酸579 - 793已带有氨基末端六组氨酸标签进行表达,表达的三聚体蛋白通过镍亲和层析纯化并结晶。晶体在低pH值下使用聚乙二醇10000作为沉淀剂生长,属于空间群C2。晶体对旋转阳极铜Kα辐射的衍射分辨率至少为1.9埃,从单个晶体收集到完整数据集,分辨率达到2.2埃。晶胞参数为a = 216.5,b = 59.2,c = 57.5埃,β = 101.3度,表明每个不对称单元有一个三聚体,溶剂含量为46%。长纤维头部与任何已知结构的其他蛋白质没有明显的序列同源性,用已知纤维头部结构进行分子置换的尝试未成功。然而,使用SIRAS相位法计算的图谱显示出一个清晰的三聚体,其形状与已知腺病毒纤维头部结构相似。结构解析正在进行中。

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