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堆积DNA核碱基中空穴转移的完全活性空间自洽场/完全活性空间微扰理论二阶研究

CASSCF/CAS-PT2 study of hole transfer in stacked DNA nucleobases.

作者信息

Blancafort Lluís, Voityuk Alexander A

机构信息

Institut de Química Computational, Departament de Química, Universitat de Girona, 17071 Girona, Spain.

出版信息

J Phys Chem A. 2006 May 25;110(20):6426-32. doi: 10.1021/jp061184s.

Abstract

CASSCF and CAS-PT2 calculations are performed for the ground and excited states of radical cations consisting of two and three nucleobases. The generalized Mulliken-Hush approach is employed for estimating electronic couplings for hole transfer in the pi-stacks. We compare the CASSCF results with data obtained within Koopmans' approximation. The calculations show that an excess charge in the ground and excited states in the systems is quite localized on a single base both at the CASSCF level and in Koopmans' picture. However, the CASSCF calculations point to a larger degree of localization and, in line with this, smaller transition dipole moments. The agreement between the CAS-PT2 corrected energy gaps and the values estimated with Koopmans' theorem is better, with the CAS-PT2 calculations giving somewhat smaller gaps. Overall, both factors result in smaller CASSCF/CAS-PT2 couplings, which are reduced by up to 40% of the couplings calculated using Koopmans' approximation. The tabulated data can be used as benchmark values for the electronic couplings of stacked nucleobases. For the base trimers, comparison of the results obtained within two- and three-state models show that the multistate treatment should be applied to derive reliable estimates. Finally, the superexchange approach to estimate the donor acceptor electronic coupling in the stacks GAG and GTG is considered.

摘要

对由两个和三个核碱基组成的自由基阳离子的基态和激发态进行了完全活性空间自洽场(CASSCF)和完全活性空间微扰理论二级近似(CAS-PT2)计算。采用广义穆利肯-赫什方法估算π-堆积中空穴转移的电子耦合。我们将CASSCF结果与在库普曼斯近似下获得的数据进行了比较。计算表明,在CASSCF水平和库普曼斯图景中,体系基态和激发态中的过量电荷都相当局域在单个碱基上。然而,CASSCF计算表明局域程度更大,与此一致的是,跃迁偶极矩更小。CAS-PT2校正的能隙与用库普曼斯定理估算的值之间的一致性更好,CAS-PT2计算给出的能隙略小。总体而言,这两个因素导致CASSCF/CAS-PT2耦合更小,比用库普曼斯近似计算的耦合减少了高达40%。列表数据可作为堆积核碱基电子耦合的基准值。对于碱基三聚体,在二态和三态模型中获得的结果比较表明,应采用多态处理来获得可靠的估算。最后,考虑了用超交换方法估算堆积的GAG和GTG中的供体-受体电子耦合。

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