Cho Hoon, Huang Lingyu, Hamza Adel, Gao Daquan, Zhan Chang-Guo, Tai Hsin-Hsiung
Polymer Science Engineering, Chosun University, Gwangju 501-579, Republic of Korea.
Bioorg Med Chem. 2006 Oct 1;14(19):6486-91. doi: 10.1016/j.bmc.2006.06.030. Epub 2006 Jul 7.
NAD+-dependent 15-hydroxyprostaglandin dehydrogenase (15-PGDH), a member of the short-chain dehydrogenase/reductase (SDR) family, catalyzes the first step in the catabolic pathways of prostaglandins and lipoxins. This enzyme oxidizes the C-15 hydroxyl group of prostaglandins and lipoxins to produce 15-keto metabolites which exhibit greatly reduced biological activities. A three-dimensional (3D) structure of 15-PGDH based on the crystal structures of the levodione reductase and tropinone reductase-II was generated and used for docking study with NAD+ coenzyme and PGE2 substrate. Three well-conserved residues among SDR family which correspond to Ser-138, Tyr-151, and Lys-155 of 15-PGDH have been shown to participate in the catalytic reaction. Based on the molecular interactions observed from 3D structure of 15-PGDH, we further propose that Gln-148 in 15-PGDH is important in properly positioning the 15-hydroxyl group of PGE2 by hydrogen bonding with the side-chain oxygen atom of Gln-148. This residue is found to be less conserved and replaceable by glutamyl, histidinyl, and asparaginyl residues in SDR family. Accordingly, site-directed mutagenesis of Gln-148 of 15-PGDH to alanine, glutamic acid, histidine, and asparagine (Q148A, Q148E, Q148H, and Q148N) was carried out. The activity of mutant Q148A was not detectable, whereas those of mutants Q148E, Q148H, and Q148N were comparable to or higher than the wild type. This indicates that the side-chain oxygen or nitrogen atom at position 148 of 15-PGDH plays an important role in anchoring C-15 hydroxyl group of PGE2 through hydrogen bonding for catalytic reaction.
烟酰胺腺嘌呤二核苷酸(NAD⁺)依赖性15-羟基前列腺素脱氢酶(15-PGDH)是短链脱氢酶/还原酶(SDR)家族的成员,催化前列腺素和脂氧素分解代谢途径的第一步。该酶氧化前列腺素和脂氧素的C-15羟基,生成生物活性大大降低的15-酮代谢物。基于左二酮还原酶和托品酮还原酶-II的晶体结构生成了15-PGDH的三维(3D)结构,并用于与NAD⁺辅酶和前列腺素E2(PGE2)底物的对接研究。SDR家族中三个保守性良好的残基,对应于15-PGDH的Ser-138、Tyr-151和Lys-155,已被证明参与催化反应。基于从15-PGDH的3D结构观察到的分子相互作用,我们进一步提出15-PGDH中的Gln-148通过与Gln-148的侧链氧原子形成氢键来正确定位PGE2的15-羟基,这一点很重要。发现该残基在SDR家族中的保守性较低,可被谷氨酰胺、组氨酸和天冬酰胺残基取代。因此,将15-PGDH的Gln-148定点突变为丙氨酸、谷氨酸、组氨酸和天冬酰胺(Q148A、Q148E、Q148H和Q148N)。突变体Q148A的活性无法检测到,而突变体Q148E、Q148H和Q148N的活性与野生型相当或更高。这表明15-PGDH第148位的侧链氧或氮原子在通过氢键锚定PGE2的C-15羟基以进行催化反应中起重要作用。