Napari Ismo, Vehkamäki Hanna
Department of Physical Sciences, University of Helsinki, P.O. Box 64, FI-00014 Helsinki, Finland.
J Chem Phys. 2006 Sep 7;125(9):094313. doi: 10.1063/1.2346674.
In this study we have investigated the dynamics of small water clusters using microcanonical molecular dynamics simulations. The clusters are formed by colliding vapor monomers with target clusters of two and five molecules. The monomers are sampled from a thermal ensemble at T=300 K and target clusters with several total energies are considered. We compare rigid extended simple point charge water with flexible counterparts having intramolecular harmonic bonds with force constants 10(3) and 10(5) kcal(mol A2). We show that the lifetimes of the clusters formed via collision process are similar for the rigid model and the flexible model with the bigger force constant, if the translational temperatures of the target cluster molecules are equal. The model with the smaller force constant results in much longer lifetimes due to the stabilizing effect caused by the kinetic energy transfer into internal vibration of the molecules. This process may take several hundreds of picoseconds, giving rise to time-dependent decay rates of constant-energy clusters. A study of binary collisions of water molecules shows that the introduction of flexibility to the molecules increases the possibility of dimer formation and thus offers an alternative route for dimer production in vapors. Our results imply that allowing for internal degrees of freedom is likely to enhance gas-liquid nucleation rates in water simulations.
在本研究中,我们使用微正则分子动力学模拟研究了小水团簇的动力学。这些团簇是通过使气相单体与由两个和五个分子组成的目标团簇碰撞而形成的。单体是从T = 300 K的热系综中采样得到的,并考虑了具有几种总能量的目标团簇。我们将刚性扩展简单点电荷水与具有分子内谐性键且力常数分别为10³和10⁵ kcal/(mol Ų)的柔性对应物进行了比较。我们表明,如果目标团簇分子的平动温度相等,对于刚性模型和具有较大力常数的柔性模型,通过碰撞过程形成的团簇的寿命相似。由于动能转移到分子的内部振动而产生的稳定作用,具有较小力常数的模型导致团簇寿命长得多。这个过程可能需要几百皮秒,从而导致等能团簇的时间依赖性衰变率。对水分子二元碰撞的研究表明,分子柔性的引入增加了二聚体形成的可能性,因此为蒸汽中二聚体的产生提供了一条替代途径。我们的结果表明,在水模拟中考虑分子的内部自由度可能会提高气液成核速率。