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正反馈、随机性与遗传感受态

Positive feedback, stochasticity and genetic competence.

作者信息

Karmakar Rajesh, Bose Indrani

机构信息

Department of Physics, Bose Institute, Kolkata, India.

出版信息

Phys Biol. 2007 Mar 16;4(1):29-37. doi: 10.1088/1478-3975/4/1/004.

Abstract

A single gene, regulating its own expression via a positive feedback loop, constitutes a common motif in gene regulatory networks and signalling cascades. Recent experiments on the development of competence in the bacterial population B. subtilis show that the autoregulatory genetic module by itself can give rise to two types of cellular states. The states correspond to the low and high expression states of the master regulator ComK. The high expression state is attained when the ComK protein level exceeds a threshold value leading to a full activation of the autostimulatory loop. Stochasticity in gene expression drives the transitions between the two stable states. In this paper, we explain the appearance of bimodal protein distributions in B. subtilis cell population in the framework of three possible scenarios. In two of the cases, bistability provides the basis for binary gene expression. In the third case, the system is monostable in a deterministic description and stochasticity in gene expression is solely responsible for the appearance of the two expression states.

摘要

单个基因通过正反馈回路调节自身表达,这是基因调控网络和信号级联中的一个常见基序。最近关于枯草芽孢杆菌群体感受态发育的实验表明,自调控遗传模块本身可导致两种细胞状态。这些状态对应于主调节因子ComK的低表达和高表达状态。当ComK蛋白水平超过阈值,导致自刺激回路完全激活时,就会达到高表达状态。基因表达中的随机性驱动了两种稳定状态之间的转变。在本文中,我们在三种可能的情形框架下解释了枯草芽孢杆菌细胞群体中双峰蛋白分布的出现。在其中两种情况下,双稳性为二元基因表达提供了基础。在第三种情况下,该系统在确定性描述中是单稳的,基因表达中的随机性是两种表达状态出现的唯一原因。

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