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造血干细胞的谱系特化:数学建模及生物学意义

Lineage specification of hematopoietic stem cells: mathematical modeling and biological implications.

作者信息

Glauche Ingmar, Cross Michael, Loeffler Markus, Roeder Ingo

机构信息

Institute for Medical Informatics, Statistics and Epidemiology, University of Leipzig, Leipzig, Germany.

出版信息

Stem Cells. 2007 Jul;25(7):1791-9. doi: 10.1634/stemcells.2007-0025. Epub 2007 Apr 5.

Abstract

Lineage specification of hematopoietic stem cells is considered a progressive restriction in lineage potential. This view is consistent with observations that differentiation and lineage specification is preceded by a low-level coexpression of lineage specific, potentially antagonistic genes in early progenitor cells. This coexistence, commonly referred to as priming, disappears in the course of differentiation when certain lineage-restricted genes are upregulated while others are downregulated. Based on this phenomenological description, we propose a quantitative model that describes lineage specification as a competition process between different interacting lineage propensities. The competition is governed by environmental stimuli promoting a drift from a multipotent coexpression to the dominance of one lineage. The assumption of a context-dependent intracellular differentiation control is consistently embedded into our previously proposed model of hematopoietic stem cell organization. The extended model, which comprises self-renewal and lineage specification, is verified using available data on the lineage specification potential of primary hematopoietic stem cells and on the differentiation kinetics of the FDCP-mix cell line. The model provides a number of experimentally testable predictions. From our results, we conclude that lineage specification is best described as a flexible and temporally extended process in which lineage commitment emerges as the result of a sequence of small decision steps. The proposed model provides a novel systems biological view on the functioning of lineage specification in adult tissue stem cells and its connections to the self-renewal properties of these cells. Disclosure of potential conflicts of interest is found at the end of this article.

摘要

造血干细胞的谱系特化被认为是谱系潜能的逐步限制。这一观点与以下观察结果一致:在早期祖细胞中,分化和谱系特化之前存在谱系特异性、潜在拮抗基因的低水平共表达。这种共存,通常称为启动,在分化过程中消失,此时某些谱系限制性基因上调而其他基因下调。基于这种现象学描述,我们提出了一个定量模型,将谱系特化描述为不同相互作用的谱系倾向之间的竞争过程。这种竞争由环境刺激控制,促使从多能共表达向一个谱系的主导地位漂移。细胞内分化的上下文依赖性控制假设始终嵌入我们先前提出的造血干细胞组织模型中。这个扩展模型包括自我更新和谱系特化,使用关于原代造血干细胞谱系特化潜能和FDCP-mix细胞系分化动力学的现有数据进行了验证。该模型提供了许多可通过实验检验的预测。从我们的结果来看,我们得出结论,谱系特化最好被描述为一个灵活且时间上扩展的过程,其中谱系承诺是一系列小决策步骤的结果。所提出的模型为成体组织干细胞中谱系特化的功能及其与这些细胞自我更新特性的联系提供了一种新的系统生物学观点。潜在利益冲突的披露见本文末尾。

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