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自诱导物耦合基因振荡器阵列中的固有多稳定性。

Inherent multistability in arrays of autoinducer coupled genetic oscillators.

作者信息

Koseska A, Volkov E, Zaikin A, Kurths J

机构信息

Institut für Physik, Potsdam Universität, Am Neuen Palais 10, D-14469 Potsdam, Germany.

出版信息

Phys Rev E Stat Nonlin Soft Matter Phys. 2007 Mar;75(3 Pt 1):031916. doi: 10.1103/PhysRevE.75.031916. Epub 2007 Mar 30.

Abstract

Rhythm generation mechanisms are very important for genetic network functions as well as for the design of synthetic genetic circuits. A significant attention to date has been focused on the synchronization of communicating genetic units, which results in the production of an unified rhythm. In contrast to this we address the question: what mechanisms of intercell communication can be responsible for multirhythmicity in globally coupled genetic units? Here, we show that an autoinducer intercell communication system that provides coupling between synthetic genetic oscillators will inherently lead to multirhythmicity and the appearance of several coexisting dynamical regimes, if the time evolution of the genetic network can be split in two well-separated time scales. We investigate in detail a variety of dynamical regimes in a genetic population and show the possibility for multiple element distributions between clusters, as well as the possibility of generating complex oscillations with different return times in one limit cycle.

摘要

节律产生机制对于遗传网络功能以及合成遗传电路的设计都非常重要。迄今为止,大量关注都集中在通信遗传单元的同步上,这导致了统一节律的产生。与此相反,我们提出一个问题:在全局耦合的遗传单元中,哪些细胞间通信机制会导致多节律性?在这里,我们表明,如果遗传网络的时间演化可以分为两个明显分开的时间尺度,那么一个在合成遗传振荡器之间提供耦合的自诱导细胞间通信系统将固有地导致多节律性以及几种共存动力学状态的出现。我们详细研究了遗传群体中的各种动力学状态,并展示了簇之间多种元素分布的可能性,以及在一个极限环中产生具有不同返回时间的复杂振荡的可能性。

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