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微生物群落的变化是对缺氧条件下氯苯高效降解的一种响应。

Microbial community shifts as a response to efficient degradation of chlorobenzene under hypoxic conditions.

作者信息

Kiesel Bärbel, Balcke Gerd Ulrich, Dietrich Jörg, Vogt Carsten, Geyer Roland

机构信息

Department of Environmental Microbiology, UFZ, Helmholtz Centre for Environmental Research, Permoserstrasse 15, 04318 Leipzig, Germany.

出版信息

Biodegradation. 2008 Jun;19(3):435-46. doi: 10.1007/s10532-007-9149-z. Epub 2007 Sep 20.

Abstract

Limitations in the availability of oxygen restrict aerobic biodegradation of chloroaromatic compounds in groundwater ecosystems. In this context the activity of ring-cleaving chlorocatechol dioxygenases (CC12O) is crucial for effective mineralization. Previously we demonstrated that oxygen-related enzyme characteristics of CC12O can vary widely among the Proteobacteria (Balcke et al. submitted). Here, we investigated how strains with different ability to transform intermediary 3-chlorocatechol integrate into biodegradation of chlorobenzene (CB) under low or high oxygen availability. Pseudomonas veronii UFZ B549 and Acidovorax facilis UFZ B530, which had differing oxygen affinities for CC12O, were mixed together at different proportions (20:80; 80:20), and compared for degradation of chlorobenzene under oxic (215 microM O2) and hypoxic (11 microM O2) conditions. Changes in community composition in binary mixed cultures were determined and compared with an indigenous groundwater community, cultivated under comparable conditions. Community shifts were determined by FISH (fluorescent in situ hybridization) in our model system and SSCP (single stranded conformation polymorphism) fingerprinting in the groundwater community, as well as by analysis of respiratory quinones of taxonomic value. Hypoxia led to enrichment of Acidovoracae in the groundwater and binary cultures. Under hypoxic conditions cis,cis-2-chloromuconate released to the medium by A. facilis allowed for concomitant growth of P. veronii, although its low-affinity type CC12O would not imply growth on CB. Vice versa, increasing abundance of P. veronii induced intermediary 3-chlorocatechol accumulation, which was reduced by growth of A. facilis. Thus, reduced oxygen availability caused syntrophic rather than competitive interactions.

摘要

氧气供应的限制制约了地下水生态系统中氯代芳香族化合物的需氧生物降解。在此背景下,裂解环的氯邻苯二酚双加氧酶(CC12O)的活性对于有效矿化至关重要。此前我们证明,CC12O与氧气相关的酶特性在变形菌门中可能有很大差异(Balcke等人已提交)。在这里,我们研究了具有不同能力转化中间产物3-氯邻苯二酚的菌株在低氧或高氧供应条件下如何整合到氯苯(CB)的生物降解过程中。对CC12O具有不同氧亲和力的维罗纳假单胞菌UFZ B549和嗜酸酸食菌UFZ B530以不同比例(20:80;80:20)混合在一起,并比较它们在有氧(215微摩尔O2)和缺氧(11微摩尔O2)条件下对氯苯的降解情况。测定二元混合培养物中群落组成的变化,并与在类似条件下培养的本地地下水群落进行比较。在我们的模型系统中通过荧光原位杂交(FISH)以及在地下水群落中通过单链构象多态性(SSCP)指纹图谱确定群落变化,同时通过分析具有分类学价值的呼吸醌来确定群落变化。缺氧导致地下水和二元培养物中嗜酸酸食菌科富集。在缺氧条件下,嗜酸酸食菌释放到培养基中的顺,顺-2-氯粘康酸使得维罗纳假单胞菌能够同时生长,尽管其低亲和力型CC12O并不意味着能以CB为生长底物。反之,维罗纳假单胞菌丰度的增加会导致中间产物3-氯邻苯二酚积累,而嗜酸酸食菌的生长会减少这种积累。因此氧供应减少导致了互营而非竞争相互作用。

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