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基因活性谱数据库。

The Genetic Activity Profile database.

作者信息

Waters M D, Stack H F, Garrett N E, Jackson M A

机构信息

Genetic Toxicology Division, U.S. Environmental Protection Agency, Research Triangle Park, NC 27711.

出版信息

Environ Health Perspect. 1991 Dec;96:41-5. doi: 10.1289/ehp.919641.

Abstract

A graphic approach termed a Genetic Activity Profile (GAP) has been developed to display a matrix of data on the genetic and related effects of selected chemical agents. The profiles provide a visual overview of the quantitative (doses) and qualitative (test results) data for each chemical. Either the lowest effective dose (LED) or highest ineffective dose (HID) is recorded for each agent and bioassay. Up to 200 different test systems are represented across the GAP. Bioassay systems are organized according to the phylogeny of the test organisms and the end points of genetic activity. The methodology for the production and evaluation of GAPs has been developed in collaboration with the International Agency for Research on Cancer. Data on individual chemicals have been compiled by IARC and by the U.S. Environmental Protection Agency. Data are available on 299 compounds selected from volumes 1-50 of the IARC Monographs and on 115 compounds identified as Superfund Priority Substances. Software to display the GAPs on an IBM-compatible personal computer is available from the authors. Structurally similar compounds frequently display qualitatively and quantitatively similar GAPs. By examining the patterns of GAPs of pairs and groups of chemicals, it is possible to make more informed decisions regarding the selection of test batteries to be used in evaluating chemical analogs. GAPs have provided useful data for the development of weight-of-evidence hazard ranking schemes. Also, some knowledge of the potential genetic activity of complex environmental mixtures may be gained from assessing the GAPs of component chemicals. The fundamental techniques and computer programs devised for the GAP database may be used to develop similar databases in other disciplines.

摘要

一种名为“遗传活性图谱(GAP)”的图形化方法已被开发出来,用于展示关于特定化学物质的遗传及相关效应的数据矩阵。这些图谱提供了每种化学物质定量(剂量)和定性(测试结果)数据的可视化概述。对于每种化学物质和生物测定,记录最低有效剂量(LED)或最高无效剂量(HID)。整个GAP涵盖多达200种不同的测试系统。生物测定系统是根据测试生物的系统发育和遗传活性终点进行组织的。GAP的制作和评估方法是与国际癌症研究机构合作开发的。关于单个化学物质的数据由国际癌症研究机构和美国环境保护局汇编。可获取关于从《国际癌症研究机构专论》第1 - 50卷中选出的299种化合物以及被确定为超级基金优先物质的115种化合物的数据。作者提供了在IBM兼容个人计算机上展示GAP的软件。结构相似的化合物通常在定性和定量方面显示出相似的GAP。通过检查化学物质对和化学物质组的GAP模式,可以在选择用于评估化学类似物的测试组时做出更明智的决策。GAP为证据权重危害排名方案的制定提供了有用的数据。此外,通过评估成分化学物质的GAP,可能会获得一些关于复杂环境混合物潜在遗传活性的知识。为GAP数据库设计的基本技术和计算机程序可用于在其他学科中开发类似的数据库。

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