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微生物的代谢通量分析与代谢工程

Metabolic flux analysis and metabolic engineering of microorganisms.

作者信息

Kim Hyun Uk, Kim Tae Yong, Lee Sang Yup

机构信息

Department of Chemical and Biomolecular Engineering (BK21 Program), Metabolic and Biomolecular Engineering National Research Laboratory, Korea Advanced Institute of Science and Technology, Daejeon 305-701, Republic of Korea.

出版信息

Mol Biosyst. 2008 Feb;4(2):113-20. doi: 10.1039/b712395g. Epub 2007 Oct 16.

Abstract

Recent advances in metabolic flux analysis including genome-scale constraints-based flux analysis and its applications in metabolic engineering are reviewed. Various computational aspects of constraints-based flux analysis including genome-scale stoichiometric models, additional constraints used for the improved accuracy, and several algorithms for identifying the target genes to be manipulated are described. Also, some of the successful applications of metabolic flux analysis in metabolic engineering are reviewed. Finally, we discuss the limitations that need to be overcome to make the results of genome-scale flux analysis more realistically represent the real cell metabolism.

摘要

本文综述了代谢通量分析的最新进展,包括基于基因组规模约束的通量分析及其在代谢工程中的应用。描述了基于约束的通量分析的各种计算方面,包括基因组规模的化学计量模型、用于提高准确性的附加约束以及几种用于识别待操作目标基因的算法。此外,还综述了代谢通量分析在代谢工程中的一些成功应用。最后,我们讨论了为使基因组规模通量分析结果更真实地反映真实细胞代谢而需要克服的局限性。

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