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连翘芽孢杆菌新种,一种从金钟连翘根际土壤中分离出的固氮菌种。

Paenibacillus forsythiae sp. nov., a nitrogen-fixing species isolated from rhizosphere soil of Forsythia mira.

作者信息

Ma Yu-Chao, Chen San-Feng

机构信息

National Key Laboratory for Agrobiotechnology, China Agricultural University, Beijing 100094, PR China.

出版信息

Int J Syst Evol Microbiol. 2008 Feb;58(Pt 2):319-23. doi: 10.1099/ijs.0.65238-0.

Abstract

A nitrogen-fixing bacterium, designated strain T98(T), was isolated from rhizosphere soil of Forsythia mira. Phylogenetic analysis based on a fragment of the nifH gene and the full-length 16S rRNA gene sequence revealed that strain T98(T) was a member of the genus Paenibacillus. High levels of 16S rRNA gene similarity were found between strain T98(T) and Paenibacillus durus ATCC 35681(T) (97.0 %), Paenibacillus sabinae DSM 17841(T) (98.3 %) and Paenibacillus zanthoxyli DSM 18202(T) (96.8 %). Levels of 16S rRNA gene sequence similarity between strain T98(T) and the type strains of other recognized members of the genus Paenibacillus were below 97.0 %. Levels of DNA-DNA relatedness between strain T98(T) and P. durus ATCC 35681(T), P. sabinae DSM 17841(T) and P. zanthoxyli DSM 18202(T) were 27.6, 30.0 and 32.1 %, respectively. The DNA G+C content of strain T98(T) was 50.4 mol%. The major fatty acids were anteiso-C(15 : 0), C(16 : 0) and iso-C(16 : 0). On the basis of its phenotypic characteristics and levels of DNA-DNA hybridization, strain T98(T) is considered to represent a novel species of the genus Paenibacillus, for which the name Paenibacillus forsythiae sp. nov. is proposed. The type strain is T98(T) (=CCBAU 10203(T) =DSM 17842(T)).

摘要

从金钟连翘根际土壤中分离出一株固氮细菌,命名为菌株T98(T)。基于nifH基因片段和全长16S rRNA基因序列的系统发育分析表明,菌株T98(T)是芽孢杆菌属的成员。菌株T98(T)与硬芽孢杆菌ATCC 35681(T)(97.0%)、沙宾芽孢杆菌DSM 17841(T)(98.3%)和花椒芽孢杆菌DSM 18202(T)(96.8%)之间的16S rRNA基因相似度较高。菌株T98(T)与芽孢杆菌属其他已确认成员的模式菌株之间的16S rRNA基因序列相似度低于97.0%。菌株T98(T)与硬芽孢杆菌ATCC 35681(T)、沙宾芽孢杆菌DSM 17841(T)和花椒芽孢杆菌DSM 18202(T)的DNA-DNA相关性分别为27.6%、30.0%和32.1%。菌株T98(T)的DNA G+C含量为50.4 mol%。主要脂肪酸为anteiso-C(15 : 0)、C(16 : 0)和iso-C(16 : 0)。基于其表型特征和DNA-DNA杂交水平,菌株T98(T)被认为代表芽孢杆菌属的一个新物种,为此提出名为连翘芽孢杆菌新种(Paenibacillus forsythiae sp. nov.)。模式菌株为T98(T)(=CCBAU 10203(T)=DSM 17842(T))。

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