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血管生成的计算与数学建模。

Computational and mathematical modeling of angiogenesis.

作者信息

Peirce Shayn M

机构信息

Department of Biomedical Engineering, University of Virginia, Charlottesville, Virginia 22908, USA.

出版信息

Microcirculation. 2008 Nov;15(8):739-51. doi: 10.1080/10739680802220331.

Abstract

Over the past two decades, a number of mathematical and computational models have been developed to study different aspects of angiogenesis that span the spatial and temporal scales encompassed by this complex process. For example, models have been built to investigate how growth factors and receptors signal endothelial cell proliferation, how groups of endothelial cells assemble into individual vessels, and how tumors recruit the ingrowth of whole microvascular networks. A prudent question to pose is: "what have we learned from these models?" This review aims to answer this question as it pertains to angiogenesis in the context of normal physiological growth, tumorigenesis, wound healing, tissue engineering, and the design of therapeutic strategies. We also provide a framework for parsing angiogenesis models into categories, according to the type of modeling approach used, the spatial and temporal scales simulated, and the overarching question being posed to the model. Finally, this review introduces some of the simplification strategies and assumptions used in model building, discusses model validation, and makes recommendations for application of modeling approaches to unresolved questions in the field.

摘要

在过去二十年中,已经开发了许多数学和计算模型来研究血管生成的不同方面,这些方面涵盖了这个复杂过程所涉及的空间和时间尺度。例如,已经建立了模型来研究生长因子和受体如何信号传导内皮细胞增殖、内皮细胞群如何组装成单个血管,以及肿瘤如何募集整个微血管网络的向内生长。一个审慎的问题是:“我们从这些模型中学到了什么?” 本综述旨在回答这个问题,因为它涉及正常生理生长、肿瘤发生、伤口愈合、组织工程以及治疗策略设计背景下的血管生成。我们还根据所使用的建模方法类型、模拟的空间和时间尺度以及向模型提出的总体问题,提供了一个将血管生成模型分类的框架。最后,本综述介绍了模型构建中使用的一些简化策略和假设,讨论了模型验证,并对将建模方法应用于该领域未解决的问题提出了建议。

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本文引用的文献

1
Models for the study of angiogenesis.
Curr Pharm Des. 2008;14(4):371-7. doi: 10.2174/138161208783497741.
2
Strategies to enhance capillary formation inside biomaterials: a computational study.
Tissue Eng. 2007 Aug;13(8):2073-86. doi: 10.1089/ten.2006.0057.
3
Multi-scale computational models of pro-angiogenic treatments in peripheral arterial disease.
Ann Biomed Eng. 2007 Jun;35(6):982-94. doi: 10.1007/s10439-007-9303-0. Epub 2007 Apr 10.
5
A cell-based model exhibiting branching and anastomosis during tumor-induced angiogenesis.
Biophys J. 2007 May 1;92(9):3105-21. doi: 10.1529/biophysj.106.101501. Epub 2007 Feb 2.
6
Targeting neuropilin-1 to inhibit VEGF signaling in cancer: Comparison of therapeutic approaches.
PLoS Comput Biol. 2006 Dec 29;2(12):e180. doi: 10.1371/journal.pcbi.0020180. Epub 2006 Nov 16.
7
VEGF gradients, receptor activation, and sprout guidance in resting and exercising skeletal muscle.
J Appl Physiol (1985). 2007 Feb;102(2):722-34. doi: 10.1152/japplphysiol.00800.2006. Epub 2006 Oct 12.
8
Modeling the effects of vasculature evolution on early brain tumor growth.
J Theor Biol. 2006 Dec 21;243(4):517-31. doi: 10.1016/j.jtbi.2006.07.002. Epub 2006 Jul 15.
9
Mathematical modeling of tumor-induced angiogenesis.
Annu Rev Biomed Eng. 2006;8:233-57. doi: 10.1146/annurev.bioeng.8.061505.095807.
10
Simulating complex tumor dynamics from avascular to vascular growth using a general level-set method.
J Math Biol. 2006 Jul;53(1):86-134. doi: 10.1007/s00285-006-0378-2. Epub 2006 Apr 28.

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