Carver Tim, Thomson Nick, Bleasby Alan, Berriman Matthew, Parkhill Julian
Wellcome Trust Sanger Institute, CB10 1SA and European Bioinformatics Institute, Wellcome Trust Genome Campus, Hinxton, Cambridge, CB10 1SD, UK.
Bioinformatics. 2009 Jan 1;25(1):119-20. doi: 10.1093/bioinformatics/btn578. Epub 2008 Nov 5.
DNAPlotter is an interactive Java application for generating circular and linear representations of genomes. Making use of the Artemis libraries to provide a user-friendly method of loading in sequence files (EMBL, GenBank, GFF) as well as data from relational databases, it filters features of interest to display on separate user-definable tracks. It can be used to produce publication quality images for papers or web pages.
DNAPlotter is freely available (under a GPL licence) for download (for MacOSX, UNIX and Windows) at the Wellcome Trust Sanger Institute web sites: http://www.sanger.ac.uk/Software/Artemis/circular/
DNAPlotter是一个用于生成基因组环形和线性表示的交互式Java应用程序。它利用阿耳特弥斯库提供一种用户友好的方法来加载序列文件(EMBL、GenBank、GFF)以及来自关系数据库的数据,过滤感兴趣的特征以显示在单独的用户可定义轨道上。它可用于为论文或网页生成具有出版质量的图像。
DNAPlotter可在惠康信托桑格研究所网站(http://www.sanger.ac.uk/Software/Artemis/circular/)上免费下载(遵循GPL许可,适用于MacOSX、UNIX和Windows)。