Asen Iris, Djuranovic Sergej, Lupas Andrei N, Zeth Kornelius
Department of Membrane Biochemistry, Max Planck Institute for Biochemistry, Am Klopferspitz 18, 82152 Martinsried, Germany.
J Mol Biol. 2009 Mar 6;386(4):962-75. doi: 10.1016/j.jmb.2008.10.061. Epub 2008 Oct 30.
Endospore formation in Bacillus subtilis is orchestrated by five developmental sigma factors and further modulated by several auxiliary transcription factors. One of these, SpoVT, regulates forespore-specific sigma(G)-dependent genes and plays a key role in the final stages of spore formation. We have determined the crystal structure of the isolated C-terminal domain of SpoVT at 1.5 A by experimental phasing techniques and used this model to solve the structure of the full-length SpoVT at 2.6 A by molecular replacement. SpoVT is a tetramer that shows an overall significant distortion mediated by electrostatic interactions. Two monomers dimerize via the highly charged N-terminal domains to form swapped-hairpin beta-barrels. These asymmetric dimers further tetramerize through the formation of mixed helix bundles between their C-terminal domains, which themselves fold as GAF (cGMP-specific and cGMP-stimulated phosphodiesterases, Anabaena adenylate cyclases, and Escherichia coli FhlA) domains. The combination of a swapped-hairpin beta-barrel with a GAF domain represents a novel domain architecture in transcription factors. The occurrence of SpoVT homologs throughout Bacilli and Clostridia demonstrates the ancestral origin of this factor in sporulation.
枯草芽孢杆菌中的芽孢形成由五个发育型σ因子协调,并受到几个辅助转录因子的进一步调控。其中一个因子SpoVT,调控前芽孢特异性的依赖σ(G)的基因,并在芽孢形成的最后阶段发挥关键作用。我们通过实验相位技术确定了分离的SpoVT C端结构域在1.5埃分辨率下的晶体结构,并利用该模型通过分子置换法在2.6埃分辨率下解析了全长SpoVT的结构。SpoVT是一个四聚体,通过静电相互作用呈现出整体显著的扭曲。两个单体通过高度带电的N端结构域二聚化,形成交换发夹β桶。这些不对称二聚体通过其C端结构域之间形成混合螺旋束进一步四聚化,C端结构域本身折叠成GAF(cGMP特异性和cGMP刺激的磷酸二酯酶、鱼腥藻腺苷酸环化酶和大肠杆菌FhlA)结构域。交换发夹β桶与GAF结构域的组合代表了转录因子中一种新的结构域架构。SpoVT同源物在整个芽孢杆菌属和梭菌属中的出现证明了该因子在孢子形成中的祖先起源。