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预测的基因序列C10orf112被转录,表现出组织特异性表达,并且可能对应于AD7。

Predicted gene sequence C10orf112 is transcribed, exhibits tissue-specific expression, and may correspond to AD7.

作者信息

Zubenko George S, Hughes Hugh B

机构信息

Department of Psychiatry, School of Medicine, University of Pittsburgh, Pittsburgh, PA 15213, USA.

出版信息

Genomics. 2009 Apr;93(4):376-82. doi: 10.1016/j.ygeno.2008.12.001. Epub 2009 Jan 10.

Abstract

Case-control and prospective longitudinal studies have revealed an interaction of the anonymous D10S1423 234 bp allele with the APOE4 allele in determining the age-specific risk of Alzheimer's disease (AD). The D10S1423 polymorphism resides within intron 10 of open reading frame C10orf112, whose predicted product resembles a low-density lipoprotein receptor (NCBI Build 35.1). These observations suggest that the D10S1423 234 bp allele may be in linkage disequilibrium with a C10orf112 gene variant whose product interacts with the apoE4 lipoprotein. Our initial exploration of this hypothesis focused on validating the C10orf112 gene model. RT-PCR amplification from human hippocampal mRNA confirmed that 34 of the predicted 39 exons of C10orf112 were expressed in this brain region. Northern blots revealed 1.2 kb and 3.2 kb mRNA species that hybridize to a cDNA probe consisting of contiguous exons 23-26. Expression of these C10orf112 mRNA species was limited to a subset of brain regions and heart tissue.

摘要

病例对照研究和前瞻性纵向研究表明,在决定特定年龄的阿尔茨海默病(AD)风险方面,匿名的D10S1423 234 bp等位基因与APOE4等位基因存在相互作用。D10S1423多态性位于开放阅读框C10orf112的第10内含子内,其预测产物类似于低密度脂蛋白受体(NCBI Build 35.1)。这些观察结果表明,D10S1423 234 bp等位基因可能与C10orf112基因变异处于连锁不平衡状态,该基因变异的产物与载脂蛋白E4脂蛋白相互作用。我们对这一假设的初步探索集中在验证C10orf112基因模型。从人海马体mRNA进行的RT-PCR扩增证实,C10orf112预测的39个外显子中有34个在该脑区表达。Northern印迹显示1.2 kb和3.2 kb的mRNA种类与由连续外显子23 - 26组成的cDNA探针杂交。这些C10orf112 mRNA种类的表达仅限于一部分脑区和心脏组织。

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