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粪肠球菌磷酸泛酰巯基乙胺半胱氨酸合成酶的特性与动力学

Characterization and kinetics of phosphopantothenoylcysteine synthetase from Enterococcus faecalis.

作者信息

Yao Jiangwei, Patrone James D, Dotson Garry D

机构信息

Department of Medicinal Chemistry, College of Pharmacy, University of Michigan, Ann Arbor, Michigan 48109-1065, USA.

出版信息

Biochemistry. 2009 Mar 31;48(12):2799-806. doi: 10.1021/bi802240w.

Abstract

The enzyme phosphopantothenoylcysteine synthetase (PPCS) catalyzes the nucleotide-dependent formation of phosphopantothenoylcysteine from (R)-phosphopantothenate and L-cysteine in the biosynthetic pathway leading to the formation of the essential biomolecule, coenzyme A. The Enterococcus faecalis gene coaB encodes a novel monofunctional PPCS which has been cloned into pET23a and expressed in Escherichia coli BL21 AI. The heterologous expression system yielded 30 mg of purified PPCS per liter of cell culture. The purified enzyme chromatographed as a homodimer of 28 kDa subunits on Superdex HR 200 gel filtration resin. The monofunctional protein displayed a nucleotide specificity for cytidine 5'-triphosphate (CTP) analogous to that seen for bifunctional PPCS expressed by most prokaryotes. Kinetic characterization, utilizing initial velocity and product inhibition studies, found the mechanism of PPCS to be Bi Uni Uni Bi Ping-Pong, with the nucleotide CTP binding first and CMP released last. Michaelis constants were 156, 17, and 86 microM for CTP, (R)-phosphopantothenate, and L-cysteine, respectively, and the k(cat) was 2.9 s(-1). [carboxyl-(18)O]Phosphopantothenate was prepared by hydrolysis of methyl pantothenate with Na(18)OH, followed by enzymatic phosphorylation with E. faecalis pantothenate kinase (PanK). The fate of the carboxylate oxygen of labeled phosphopantothenate, during the course of the PPCS-catalyzed reaction with CTP and L-cysteine, was monitored by (31)P NMR spectroscopy. The results show that the carboxylate oxygen of the phosphopantothenate is recovered with the CMP formed during the reaction, indicative of the formation of a phosphopantothenoyl cytidylate catalytic intermediate, which is consistent with the kinetic mechanism.

摘要

磷酸泛酰巯基乙胺合成酶(PPCS)在导致必需生物分子辅酶A形成的生物合成途径中,催化由(R)-磷酸泛酸和L-半胱氨酸通过依赖核苷酸的方式形成磷酸泛酰巯基乙胺。粪肠球菌基因coaB编码一种新型单功能PPCS,该基因已被克隆到pET23a中并在大肠杆菌BL21 AI中表达。该异源表达系统每升细胞培养物可产生30 mg纯化的PPCS。纯化后的酶在Superdex HR 200凝胶过滤树脂上以28 kDa亚基的同型二聚体形式进行层析。该单功能蛋白对胞苷5'-三磷酸(CTP)表现出核苷酸特异性,类似于大多数原核生物表达的双功能PPCS。利用初速度和产物抑制研究进行的动力学表征发现,PPCS的机制为双底物双产物乒乓机制,核苷酸CTP首先结合,CMP最后释放。CTP、(R)-磷酸泛酸和L-半胱氨酸的米氏常数分别为156、17和86 μM,催化常数k(cat)为2.9 s(-1)。[羧基-(18)O]磷酸泛酸是通过用Na(18)OH水解泛酸甲酯,然后用粪肠球菌泛酸激酶(PanK)进行酶促磷酸化制备的。在PPCS催化CTP和L-半胱氨酸反应的过程中,通过31P NMR光谱监测标记磷酸泛酸的羧基氧的去向。结果表明,磷酸泛酸的羧基氧在反应过程中与形成的CMP一起回收,表明形成了磷酸泛酰胞苷酸催化中间体,这与动力学机制一致。

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本文引用的文献

1
Inhibiting bacterial fatty acid synthesis.
J Biol Chem. 2006 Jun 30;281(26):17541-4. doi: 10.1074/jbc.R600004200. Epub 2006 Apr 28.
3
Coenzyme A biosynthesis: reconstruction of the pathway in archaea and an evolutionary scenario based on comparative genomics.
Mol Biol Evol. 2004 Jul;21(7):1242-51. doi: 10.1093/molbev/msh119. Epub 2004 Mar 10.
5
The metabolism of pantothenic acid.
J Biol Chem. 1959 Feb;234(2):370-8.
6
From genetic footprinting to antimicrobial drug targets: examples in cofactor biosynthetic pathways.
J Bacteriol. 2002 Aug;184(16):4555-72. doi: 10.1128/JB.184.16.4555-4572.2002.

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