Li Bing, Furihata Keiko, Kudo Takuji, Yokota Akira
Institute of Molecular and Cellular Biosciences, The University of Tokyo, Japan.
J Gen Appl Microbiol. 2009 Feb;55(1):19-26. doi: 10.2323/jgam.55.19.
A polyphasic study was undertaken to establish the taxonomic positions of two isolates, SK15(T) and SK60(T), from soil samples that were found to have morphological and chemical properties consistent with Kitasatospora strains. Phylogenetic analysis based on the 16S rRNA gene sequence revealed that strains SK15(T) and SK60(T) form novel evolutionary lineages within the radiation of the genus Kitasatospora and share the highest 16S rRNA gene sequences similarities with their closest relatives, Kitasatospora setae IAM 15325(T) (97.8%) and Kitasatospora mediocidica IAM 15162(T )(97.5%), respectively. However, the results of DNA-DNA hybridization experiment and phenotypic data demonstrated that strains SK15(T) and SK60(T) are distinct from their closest phylogenetic neighbors and other Kitasatospora species. For chemotaxonomic characteristics, the cell-wall peptidoglycan of strains contained both meso- and LL-diaminopimelic acids as the diamino acids, the predominant quinone system was MK-9(H(6)) and MK-9(H(8)), whole-cell hydrolysates were rich in galactose, mannose and ribose, and the major fatty acids were C(16:0), anteiso-C(15:0), iso-C(15:0) and iso-C(16:0). On the basis of both phenotypic and phylogenetic evidence, strains SK15(T) and SK60(T) were assigned to represent two novel species of the genus Kitasatospora, for which the names Kitasatospora saccharophila sp. nov. (type strain SK15(T)=JCM 14559(T)=KCTC 19566(T)) and Kitasatospora kazusanensis sp. nov. (type strain SK60(T)=JCM 14560(T)=KCTC 19565(T)) are proposed. It is also proposed that Streptomyces atroaurantiacus should be transferred to the genus Kitasatospora as Kitasatospora atroaurantiaca comb. nov. (type strain NBRC 14327(T)=DSM 41649(T)).
开展了一项多相研究,以确定从土壤样品中分离得到的两株菌株SK15(T)和SK60(T)的分类地位,发现它们具有与北里孢菌属菌株一致的形态和化学特性。基于16S rRNA基因序列的系统发育分析表明,菌株SK15(T)和SK60(T)在北里孢菌属的辐射范围内形成了新的进化分支,并且与其最接近的亲缘种,即刚毛北里孢菌IAM 15325(T)(相似度97.8%)和中度嗜杀北里孢菌IAM 15162(T)(相似度97.5%)分别具有最高的16S rRNA基因序列相似性。然而,DNA-DNA杂交实验结果和表型数据表明,菌株SK15(T)和SK60(T)与其最接近的系统发育近缘种以及其他北里孢菌属物种不同。关于化学分类特征,菌株的细胞壁肽聚糖含有内消旋二氨基庚二酸和LL-二氨基庚二酸作为二氨基酸,主要醌系统为MK-9(H(6))和MK-9(H(8)),全细胞水解产物富含半乳糖、甘露糖和核糖,主要脂肪酸为C(16:0)、anteiso-C(15:0)、iso-C(15:0)和iso-C(16:0)。基于表型和系统发育证据,菌株SK15(T)和SK60(T)被指定代表北里孢菌属的两个新物种,为此提出了嗜糖北里孢菌新种(模式菌株SK15(T)=JCM 14559(T)=KCTC 19566(T))和香取北里孢菌新种(模式菌株SK60(T)=JCM 14560(T)=KCTC 19565(T))。还建议将橙黄链霉菌转移至北里孢菌属,命名为橙黄北里孢菌新组合(模式菌株NBRC 14327(T)=DSM 41649(T))。