Suppr超能文献

来自必需双组分调节系统的多结构域组氨酸蛋白激酶的晶体学表征

Crystallographic characterization of a multidomain histidine protein kinase from an essential two-component regulatory system.

作者信息

Zhao Haiyan, Tang Liang

机构信息

Department of Molecular Biosciences, University of Kansas, Lawrence, KS 66045, USA.

出版信息

Acta Crystallogr Sect F Struct Biol Cryst Commun. 2009 Apr 1;65(Pt 4):346-9. doi: 10.1107/S174430910900668X. Epub 2009 Mar 21.

Abstract

YycGF is a highly conserved two-component signal transduction system that is specific to low-G+C Gram-positive bacteria, including many important human pathogens. It has been recognized as a crucial regulatory system for cell-wall metabolism. YycG, the histidine protein kinase of this system, is a multidomain transmembrane protein. The truncated cytoplasmic portion of YycG from Bacillus subtilis encompassing the PAS domain, the dimerization domain and the catalytic domain was expressed, purified and crystallized. X-ray data were collected to 2.8 A resolution with a completeness of 98.2% and an overall R(merge) of 5.6%. The crystals belonged to space group P6(1) or P6(5), with unit-cell parameters a = 135.0, c = 133.0 A. The selenomethionine-substituted version of the protein was crystallized and X-ray data were collected to 3.6 A resolution for subsequent MAD phasing.

摘要

YycGF是一种高度保守的双组分信号转导系统,它是低G+C革兰氏阳性菌所特有的,包括许多重要的人类病原体。它已被公认为细胞壁代谢的关键调节系统。该系统的组氨酸蛋白激酶YycG是一种多结构域跨膜蛋白。表达、纯化并结晶了来自枯草芽孢杆菌的YycG截短细胞质部分,其包含PAS结构域、二聚化结构域和催化结构域。收集到分辨率为2.8 Å的X射线数据,完整性为98.2%,总体合并R值为5.6%。晶体属于空间群P6(1)或P6(5),晶胞参数a = 135.0,c = 133.0 Å。对该蛋白的硒代甲硫氨酸取代版本进行结晶,并收集到分辨率为3.6 Å的X射线数据用于后续的多波长反常散射相位分析。

相似文献

1
Crystallographic characterization of a multidomain histidine protein kinase from an essential two-component regulatory system.
Acta Crystallogr Sect F Struct Biol Cryst Commun. 2009 Apr 1;65(Pt 4):346-9. doi: 10.1107/S174430910900668X. Epub 2009 Mar 21.
2
Preliminary crystallographic studies of the regulatory domain of response regulator YycF from an essential two-component signal transduction system.
Acta Crystallogr Sect F Struct Biol Cryst Commun. 2009 Jul 1;65(Pt 7):719-22. doi: 10.1107/S1744309109022696. Epub 2009 Jun 27.
4
Dissection of the functional and structural domains of phosphorelay histidine kinase A of Bacillus subtilis.
J Bacteriol. 2001 May;183(9):2795-802. doi: 10.1128/JB.183.9.2795-2802.2001.
5
Structure of the sporulation histidine kinase inhibitor Sda from Bacillus subtilis and insights into its solution state.
Acta Crystallogr D Biol Crystallogr. 2009 Jun;65(Pt 6):574-81. doi: 10.1107/S090744490901169X. Epub 2009 May 15.
6
A matter of life and death: cell wall homeostasis and the WalKR (YycGF) essential signal transduction pathway.
Mol Microbiol. 2008 Dec;70(6):1307-22. doi: 10.1111/j.1365-2958.2008.06483.x. Epub 2008 Oct 23.
7
The essential YycFG two-component system of Bacillus subtilis.
Methods Enzymol. 2007;422:396-417. doi: 10.1016/S0076-6879(06)22020-2.
8
Changes at the KinA PAS-A dimerization interface influence histidine kinase function.
Biochemistry. 2008 Apr 1;47(13):4051-64. doi: 10.1021/bi7021156. Epub 2008 Mar 7.
10
ATP forms a stable complex with the essential histidine kinase WalK (YycG) domain.
Acta Crystallogr D Biol Crystallogr. 2012 Jul;68(Pt 7):839-45. doi: 10.1107/S090744491201373X. Epub 2012 Jun 15.

引用本文的文献

2
Preliminary crystallographic studies of the regulatory domain of response regulator YycF from an essential two-component signal transduction system.
Acta Crystallogr Sect F Struct Biol Cryst Commun. 2009 Jul 1;65(Pt 7):719-22. doi: 10.1107/S1744309109022696. Epub 2009 Jun 27.

本文引用的文献

1
Processing of X-ray diffraction data collected in oscillation mode.
Methods Enzymol. 1997;276:307-26. doi: 10.1016/S0076-6879(97)76066-X.
2
A matter of life and death: cell wall homeostasis and the WalKR (YycGF) essential signal transduction pathway.
Mol Microbiol. 2008 Dec;70(6):1307-22. doi: 10.1111/j.1365-2958.2008.06483.x. Epub 2008 Oct 23.
3
Inhibitors targeting two-component signal transduction.
Adv Exp Med Biol. 2008;631:229-36. doi: 10.1007/978-0-387-78885-2_16.
4
A sensor histidine kinase co-ordinates cell wall architecture with cell division in Bacillus subtilis.
Mol Microbiol. 2008 Aug;69(3):621-32. doi: 10.1111/j.1365-2958.2008.06308.x. Epub 2008 Jun 28.
5
Essentiality, bypass, and targeting of the YycFG (VicRK) two-component regulatory system in gram-positive bacteria.
J Bacteriol. 2008 Apr;190(8):2645-8. doi: 10.1128/JB.01682-07. Epub 2008 Feb 1.
7
Sporulation phosphorelay proteins and their complexes: crystallographic characterization.
Methods Enzymol. 2007;422:102-22. doi: 10.1016/S0076-6879(06)22005-6.
10
Structure of the entire cytoplasmic portion of a sensor histidine-kinase protein.
EMBO J. 2005 Dec 21;24(24):4247-59. doi: 10.1038/sj.emboj.7600886. Epub 2005 Dec 1.

文献AI研究员

20分钟写一篇综述,助力文献阅读效率提升50倍。

立即体验

用中文搜PubMed

大模型驱动的PubMed中文搜索引擎

马上搜索

文档翻译

学术文献翻译模型,支持多种主流文档格式。

立即体验