Taylor Mark P, Paul Wolfgang, Binder Kurt
Department of Physics, Hiram College, Hiram, Ohio 44234, USA.
Phys Rev E Stat Nonlin Soft Matter Phys. 2009 May;79(5 Pt 1):050801. doi: 10.1103/PhysRevE.79.050801. Epub 2009 May 7.
Here we report a first-order all-or-none transition from an expanded coil to a compact crystallite for a flexible polymer chain. Wang-Landau sampling is used to construct the complete density of states for square-well chains up to length 256. Analysis within both the microcanonical and canonical ensembles shows a direct freezing transition for finite length chains with sufficiently short-range interactions. This type of transition is a distinctive feature of "one-step" protein folding and our findings demonstrate that a simple homopolymer model can exhibit protein-folding thermodynamics.
在此,我们报告了柔性聚合物链从伸展的线团到紧密微晶的一级全或无转变。使用王-朗道抽样法构建了长度达256的方阱链的完整态密度。在微正则系综和正则系综中的分析均表明,对于具有足够短程相互作用的有限长度链存在直接冻结转变。这种类型的转变是“一步”蛋白质折叠的一个显著特征,我们的研究结果表明,一个简单的均聚物模型可以展现出蛋白质折叠热力学。