Pagaling Eulyn, Wang Huanzhi, Venables Madeleine, Wallace Andrew, Grant William D, Cowan Don A, Jones Brian E, Ma Yanhe, Ventosa Antonio, Heaphy Shaun
Department of Infection, Immunity, and Inflammation, University of Leicester, University Road, Leicester LE19HN, United Kingdom.
Appl Environ Microbiol. 2009 Sep;75(18):5750-60. doi: 10.1128/AEM.00040-09. Epub 2009 Jul 31.
We used cultivation-independent methods to investigate the prokaryotic biogeography of the water column in six salt lakes in Inner Mongolia, China, and a salt lake in Argentina. These lakes had different salt compositions and pH values and were at variable geographic distances, on both local and intercontinental scales, which allowed us to explore the microbial community composition within the context of both contemporary environmental conditions and geographic distance. Fourteen 16S rRNA gene clone libraries were constructed, and over 200 16S rRNA gene sequences were obtained. These sequences were used to construct biotic similarity matrices, which were used in combination with environmental similarity matrices and a distance matrix in the Mantel test to discover which factors significantly influenced biotic similarity. We showed that archaeal biogeography was influenced by contemporary environmental factors alone (Na+, CO3(2-), and HCO3(-) ion concentrations; pH; and temperature). Bacterial biogeography was influenced both by contemporary environmental factors (Na+, Mg2+, and HCO3(-) ion concentrations and pH) and by geographic distance.
我们采用非培养方法研究了中国内蒙古六个盐湖以及阿根廷一个盐湖水柱中的原核生物生物地理学。这些湖泊具有不同的盐分组成和pH值,且在本地和洲际尺度上地理距离各异,这使我们能够在当代环境条件和地理距离的背景下探索微生物群落组成。构建了14个16S rRNA基因克隆文库,获得了200多个16S rRNA基因序列。这些序列用于构建生物相似性矩阵,该矩阵与环境相似性矩阵和距离矩阵结合用于Mantel检验,以发现哪些因素显著影响生物相似性。我们发现古菌生物地理学仅受当代环境因素(Na +、CO3(2-)和HCO3(-)离子浓度、pH值和温度)影响。细菌生物地理学则受当代环境因素(Na +、Mg2 +和HCO3(-)离子浓度及pH值)和地理距离的共同影响。