Center for Precision Engineering, Harbin Institute of Technology, P.O. Box 413, Harbin 150001, PR China.
Phys Chem Chem Phys. 2010 Jan 14;12(2):406-15. doi: 10.1039/b917919d. Epub 2009 Nov 12.
Molecular dynamics (MD) simulations were performed to investigate the adsorption behavior and dynamics of Arg-Gly-Asp (RGD) tripeptide onto the rutile TiO(2) (110) perfect and grooved surfaces in aqueous solution. The simulation results suggest that, driven by the electrostatic attractions between charged groups of the tripeptide and opposite-type charges of the surface atoms, RGD substitutes the adsorbed water molecules and binds to TiO(2) surface strongly through direct interactions of carboxyl oxygen (O(coo(-))) atoms with nearby titanium atoms in the interface, in agreement with some experimental observations and theoretical data. Once bonded to both perfect and grooved surfaces, RGD tripeptides show a reasonable propensity to remain there with the carboxyl groups providing anchors to the substrate surface, while the amide groups (NH(3)(+) and NH(2)) with larger separations from the attached portions, undergo relatively remarkable fluctuations during the whole simulation time. The trajectories for atom-surface distances, backbone dihedral angles and root-mean-squared deviations from the initial structure have revealed less mobility and more stable adsorption of RGD onto grooved surface than onto perfect surface, which is confirmed again by greater values of adsorption energy for available grooved surfaces.
采用分子动力学(MD)模拟方法研究了 Arg-Gly-Asp(RGD)三肽在水溶液中于锐钛矿 TiO(2)(110)完整表面和沟槽表面的吸附行为和动力学。模拟结果表明,在带电荷的三肽基团与表面原子相反电荷之间的静电吸引力作用下,RGD 取代吸附水分子,并通过三肽中羧基氧(O(coo(-)))原子与界面附近钛原子的直接相互作用,强烈地与 TiO(2)表面结合,这与一些实验观察和理论数据一致。一旦与完整表面和沟槽表面结合,RGD 三肽就会显示出与羧基基团提供的附着点与底物表面保持附着的合理倾向,而与附着部分距离较大的酰胺基团(NH(3)(+)和 NH(2))在整个模拟过程中经历相对显著的波动。原子-表面距离、主链二面角和均方根偏差的轨迹表明,RGD 在沟槽表面的吸附比在完整表面的吸附更不易移动和更稳定,这再次通过对可用沟槽表面的吸附能的更大值得到了证实。