Leibniz-Institut für Analytische Wissenschaften - ISAS - eV- Institute for Analytical Sciences, Dortmund, Germany.
Proteomics. 2010 Apr;10(7):1522-4. doi: 10.1002/pmic.200900759.
Identification of proteins by MS plays an important role in proteomics. A crucial step concerns the identification of peptides from MS/MS spectra. The X!Tandem Project (http://www.thegpm.org/tandem) supplies an open-source search engine for this purpose. In this study, we present an open-source Java library called XTandem Parser that parses X!Tandem XML result files into an easily accessible and fully functional object model (http://xtandem-parser.googlecode.com). In addition, a graphical user interface is provided that functions as a usage example and an end-user visualization tool.
MS 鉴定的蛋白质在蛋白质组学中起着重要作用。一个关键步骤涉及从 MS/MS 光谱中鉴定肽。X!Tandem 项目(http://www.thegpm.org/tandem)为此提供了一个开源搜索引擎。在这项研究中,我们提出了一个名为 XTandem Parser 的开源 Java 库,它将 X!Tandem XML 结果文件解析为一个易于访问且功能齐全的对象模型(http://xtandem-parser.googlecode.com)。此外,还提供了一个图形用户界面,用作使用示例和最终用户可视化工具。