Molecular Biology Department, Fundación Instituto de Inmunología de Colombia, Colombia.
Mol Phylogenet Evol. 2010 May;55(2):399-408. doi: 10.1016/j.ympev.2010.02.017. Epub 2010 Feb 19.
MSP-7 is a surface protein expressed by the Plasmodium merozoite as part of a protein-complex involved in initial interaction between merozoite and erythrocyte. Contigs of seven Plasmodium species were analyzed in order to identify all msp-7 family genes. The search identified annotated and unannotated open reading frames (ORFs) and showed an uneven number of msp-7 genes among the different species of the Plasmodium lineage. A phylogenetic analysis established the presence of at least two ancestral genes and identified various lineage- and species-specific duplication events. An estimation of synonymous (d(S)) and non-synonymous substitutions (d(N)) showed higher d(S) values compared to d(N) values, suggesting the action of purifying selection on these genes, moreover no changes in omega (evolutive rates) were found in codon models test. These data together with the data obtained from the Gu's type-I functional divergence test and comparisons between evolutionary rates among orthologous and paralogous genes suggest functional redundancy. Finally, an analysis of recombination events suggests that several sequences are undergoing such process and that this mechanism could therefore be playing an important role in the emergence of new sequences. We conclude that evolution of the msp-7 family is in agreement with a birth-and-death model of evolution, as msp-7 genes have expanded until reaching an optimal gene copy number in each Plasmodium species in order to adapt to different niches.
MSP-7 是疟原虫裂殖子表面蛋白,是裂殖子与红细胞初始相互作用过程中蛋白复合物的一部分。为了鉴定所有 msp-7 家族基因,对 7 种疟原虫的序列进行了分析。该搜索确定了注释和未注释的开放阅读框 (ORF),并显示不同疟原虫谱系物种之间 msp-7 基因的数量不均。系统发育分析确立了至少存在两个祖先基因,并鉴定了各种谱系和物种特异性的重复事件。同义(d(S))和非同义(d(N))替换的估计显示 d(S)值高于 d(N)值,表明这些基因受到纯化选择的作用,此外,在密码子模型测试中未发现ω(进化率)的变化。这些数据以及从顾氏第一类功能分歧测试中获得的数据以及同源和同线基因之间的进化率比较表明存在功能冗余。最后,重组事件的分析表明,一些序列正在经历这种过程,因此这种机制可能在新序列的出现中发挥重要作用。我们得出结论,msp-7 家族的进化与进化的生死模型一致,因为 msp-7 基因已经扩展,直到在每个疟原虫物种中达到最佳基因拷贝数,以适应不同的小生境。