Division of Biochemistry, Department of Medical Biochemistry and Biophysics, Karolinska Institutet, SE-171 77 Stockholm, Sweden.
Exp Cell Res. 2010 May 1;316(8):1296-303. doi: 10.1016/j.yexcr.2010.02.032. Epub 2010 Mar 3.
The defining entity of a selenoprotein is the inclusion of at least one selenocysteine (Sec) residue in its sequence. Sec, the 21st naturally occurring genetically encoded amino acid, differs from its significantly more common structural analog cysteine (Cys) by the identity of a single atom: Sec contains selenium instead of the sulfur found in Cys. Selenium clearly has unique chemical properties that differ from sulfur, but more striking are perhaps the similarities between the two elements. Selenium was discovered by Jöns Jacob Berzelius, a renowned Swedish scientist instrumental in establishing the institution that would become Karolinska Institutet. Written at the occasion of the bicentennial anniversary of Karolinska Institutet, this mini review focuses on the unique selenium-derived properties that may potentially arise in a protein upon the inclusion of Sec in place of Cys. With 25 human genes encoding selenoproteins and in total several thousand selenoproteins yet described in nature, it seems likely that the presence of that single selenium atom of Sec should convey some specific feature, thereby explaining the existence of selenoproteins in spite of demanding and energetically costly Sec-specific synthesis machineries. Nonetheless, most, if not all, of the currently known selenoproteins are also found as Cys-containing non-selenoprotein orthologues in other organisms, wherefore any potentially unique properties of selenoproteins are yet a matter of debate. The pK(a) of free Sec (approximately 5.2) being significantly lower than that of free Cys (approximately 8.5) has often been proposed as one of the unique features of Sec. However, as discussed herein, this pK(a) difference between Sec and Cys can hardly provide an evolutionary pressure for maintenance of selenoproteins. Moreover, the typically 10- to 100-fold lower enzymatic efficiencies of Sec-to-Cys mutants of selenoprotein oxidoreductases, are also weak arguments for the overall existence of selenoproteins. Here, it is however emphasized that the inherent high nucleophilicity of Sec and thereby its higher chemical reaction rate with electrophiles, as compared to Cys, seems to be a truly unique property of Sec that cannot easily be mimicked by the basicity of Cys, even within the microenvironment of a protein. The chemical rate enhancement obtained with Sec can have other consequences than those arising from a low redox potential of some Cys-dependent proteins, typically aiming at maintaining redox equilibria. Another unique aspect of Sec compared to Cys seems to be its efficient potency to support one-electron transfer reactions, which, however, has not yet been unequivocally shown as a Sec-dependent step during the natural catalysis of any known selenoprotein enzyme.
硒蛋白的定义特征是其序列中至少包含一个硒代半胱氨酸(Sec)残基。Sec 是第 21 种天然存在的遗传编码氨基酸,与结构上更为常见的半胱氨酸(Cys)不同,仅在一个原子的身份上有所区别:Sec 含有硒,而不是 Cys 中的硫。硒显然具有与硫不同的独特化学性质,但更引人注目的也许是这两种元素之间的相似之处。硒是由著名的瑞典科学家 Jöns Jacob Berzelius 发现的,他在建立后来成为卡罗林斯卡学院的机构方面发挥了重要作用。本文是在卡罗林斯卡学院成立 200 周年之际撰写的,重点介绍了在蛋白质中包含 Sec 而不是 Cys 时,可能会出现的独特的硒衍生特性。目前已有 25 个人类基因编码硒蛋白,在自然界中总共描述了数千种硒蛋白,因此,Sec 中单个硒原子的存在似乎应该具有某种特定的特征,从而解释了尽管硒蛋白的合成需要特殊的、能量昂贵的 Sec 特异性合成机制,但硒蛋白仍然存在。尽管如此,目前已知的大多数(如果不是全部)硒蛋白在其他生物体中也作为含有半胱氨酸的非硒蛋白同源物存在,因此硒蛋白的任何潜在独特特性仍存在争议。游离 Sec 的 pK(a)(约 5.2)明显低于游离 Cys(约 8.5),这通常被认为是 Sec 的独特特征之一。然而,如本文所述,Sec 和 Cys 之间的这种 pK(a) 差异几乎不能为维持硒蛋白的存在提供进化压力。此外,硒蛋白氧化还原酶的 Sec 到 Cys 突变体的酶催化效率通常低 10 到 100 倍,这也是硒蛋白总体存在的微弱论据。在此,需要强调的是,与 Cys 相比,Sec 的固有高亲核性及其与亲电试剂的更高化学反应速率,似乎是 Sec 的一个真正独特的特性,即使在蛋白质的微环境中,Cys 的碱性也很难模拟。用 Sec 获得的化学速率增强可能会产生与一些依赖 Cys 的蛋白质的还原电位低相关的不同结果,这些蛋白质通常旨在维持氧化还原平衡。与 Cys 相比,Sec 的另一个独特方面似乎是其有效支持单电子转移反应的能力,然而,这尚未在任何已知的硒蛋白酶的天然催化过程中明确表明是一个依赖 Sec 的步骤。