Suppr超能文献

实验室动物管理助理(LAMA):用于主动研究群体的 LIMS。

Laboratory Animal Management Assistant (LAMA): a LIMS for active research colonies.

机构信息

Centre for Molecular Medicine and Therapeutics at the Child & Family Research Institute, University of British Columbia, Vancouver, BC, Canada.

出版信息

Mamm Genome. 2010 Jun;21(5-6):224-30. doi: 10.1007/s00335-010-9258-6. Epub 2010 Apr 22.

Abstract

Laboratory Animal Management Assistant (LAMA) is an internet-based system for tracking large laboratory mouse colonies. It has a user-friendly interface with powerful search capabilities that ease day-to-day tasks such as tracking breeding cages and weaning litters. LAMA was originally developed to manage hundreds of new mouse strains generated by a large functional genomics program, the Pleiades Promoter Project ( http://www.pleiades.org ). The software system has proven to be highly flexible, suitable for diverse management approaches to mouse colonies. It allows custom tagging and grouping of animals, simplifying project-specific handling and access to data. Finally, LAMA was developed in close collaboration with mouse technicians to ease the transition from paper- or Excel-based management systems to computerized tracking, allowing data export in a popular spreadsheet format and automatic printing of cage cards. LAMA is an open-access software tool, freely available to the research community at http://launchpad.net/mousedb .

摘要

实验室动物管理助手(LAMA)是一个基于互联网的系统,用于追踪大型实验室鼠群。它具有用户友好的界面和强大的搜索功能,可简化日常任务,例如跟踪繁殖笼和断奶窝。LAMA 最初是为了管理由大型功能基因组学计划(Pleiades Promoter Project,http://www.pleiades.org)产生的数百种新的小鼠品系而开发的。该软件系统已被证明具有高度的灵活性,适用于不同的小鼠群体管理方法。它允许对动物进行自定义标记和分组,简化了特定项目的处理和数据访问。最后,LAMA 是与小鼠技术人员密切合作开发的,可简化从基于纸张或 Excel 的管理系统向计算机化追踪的过渡,允许以流行的电子表格格式导出数据,并自动打印笼卡。LAMA 是一个开放获取的软件工具,可在 http://launchpad.net/mousedb 上免费提供给研究界。

相似文献

1
Laboratory Animal Management Assistant (LAMA): a LIMS for active research colonies.
Mamm Genome. 2010 Jun;21(5-6):224-30. doi: 10.1007/s00335-010-9258-6. Epub 2010 Apr 22.
2
adLIMS: a customized open source software that allows bridging clinical and basic molecular research studies.
BMC Bioinformatics. 2015;16 Suppl 9(Suppl 9):S5. doi: 10.1186/1471-2105-16-S9-S5. Epub 2015 Jun 1.
3
A Laboratory Information Management System (LIMS) for a high throughput genetic platform aimed at candidate gene mutation screening.
Bioinformatics. 2007 Sep 15;23(18):2504-6. doi: 10.1093/bioinformatics/btm365. Epub 2007 Aug 20.
6
MASTR-MS: a web-based collaborative laboratory information management system (LIMS) for metabolomics.
Metabolomics. 2017;13(2):14. doi: 10.1007/s11306-016-1142-2. Epub 2016 Dec 27.
7
The EnzymeTracker: an open-source laboratory information management system for sample tracking.
BMC Bioinformatics. 2012 Jan 26;13:15. doi: 10.1186/1471-2105-13-15.
8
MetaBar - a tool for consistent contextual data acquisition and standards compliant submission.
BMC Bioinformatics. 2010 Jun 30;11:358. doi: 10.1186/1471-2105-11-358.
9
MendeLIMS: a web-based laboratory information management system for clinical genome sequencing.
BMC Bioinformatics. 2014 Aug 27;15(1):290. doi: 10.1186/1471-2105-15-290.
10
High laboratory mouse pre-weaning mortality associated with litter overlap, advanced dam age, small and large litters.
PLoS One. 2020 Aug 12;15(8):e0236290. doi: 10.1371/journal.pone.0236290. eCollection 2020.

引用本文的文献

1
Digital Management Systems in Academic Health Sciences Laboratories: A Scoping Review.
Healthcare (Basel). 2021 Jun 16;9(6):739. doi: 10.3390/healthcare9060739.
2
Principles and application of LIMS in mouse clinics.
Mamm Genome. 2015 Oct;26(9-10):467-81. doi: 10.1007/s00335-015-9586-7. Epub 2015 Jul 25.
3
Transforming microbial genotyping: a robotic pipeline for genotyping bacterial strains.
PLoS One. 2012;7(10):e48022. doi: 10.1371/journal.pone.0048022. Epub 2012 Oct 29.
4
SAPling: a Scan-Add-Print barcoding database system to label and track asexual organisms.
J Exp Biol. 2011 Nov 1;214(Pt 21):3518-23. doi: 10.1242/jeb.059048.

本文引用的文献

2
Data and animal management software for large-scale phenotype screening.
Mamm Genome. 2006 Apr;17(4):288-97. doi: 10.1007/s00335-005-0145-5. Epub 2006 Apr 4.
3
Simple databases to monitor the generation and organisation of transgenic mouse colonies.
Transgenic Res. 2003 Apr;12(2):251-3. doi: 10.1023/a:1022908101588.
4
MICE, a program to track and monitor animals in animal facilities.
BMC Genet. 2001;2:4. doi: 10.1186/1471-2156-2-4. Epub 2001 Mar 8.
5
MouseBank: a database application for managing transgenic mouse breeding programs.
Biotechniques. 2001 Jan;30(1):130-2. doi: 10.2144/01301bc04.
6
MouseNet database: digital management of a large-scale mutagenesis project.
Mamm Genome. 2000 Jul;11(7):590-3. doi: 10.1007/s003350010112.
7
LAMS(TM)--a laboratory animal management system.
Mamm Genome. 1999 Apr;10(4):349-51. doi: 10.1007/s003359900999.
8
Recordkeeping and database analysis of breeding colonies.
Methods Enzymol. 1993;225:3-15. doi: 10.1016/0076-6879(93)25004-l.

文献AI研究员

20分钟写一篇综述,助力文献阅读效率提升50倍。

立即体验

用中文搜PubMed

大模型驱动的PubMed中文搜索引擎

马上搜索

文档翻译

学术文献翻译模型,支持多种主流文档格式。

立即体验