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人工智能技术在结直肠癌药物代谢中的应用:本体论和复杂网络。

Artificial intelligence techniques for colorectal cancer drug metabolism: ontology and complex network.

机构信息

Department of Information and Communication Technologies, Computer Science Faculty, University of A Coruña, Campus de Elviña, S/N, 15071 A Coruña, Spain.

出版信息

Curr Drug Metab. 2010 May;11(4):347-68. doi: 10.2174/138920010791514289.

Abstract

Colorectal cancer is one of the most frequent types of cancer in the world and generates important social impact. The understanding of the specific metabolism of this disease and the transformations of the specific drugs will allow finding effective prevention, diagnosis and treatment of the colorectal cancer. All the terms that describe the drug metabolism contribute to the construction of ontology in order to help scientists to link the correlated information and to find the most useful data about this topic. The molecular components involved in this metabolism are included in complex network such as metabolic pathways in order to describe all the molecular interactions in the colorectal cancer. The graphical method of processing biological information such as graphs and complex networks leads to the numerical characterization of the colorectal cancer drug metabolic network by using invariant values named topological indices. Thus, this method can help scientists to study the most important elements in the metabolic pathways and the dynamics of the networks during mutations, denaturation or evolution for any type of disease. This review presents the last studies regarding ontology and complex networks of the colorectal cancer drug metabolism and a basic topology characterization of the drug metabolic process sub-ontology from the Gene Ontology.

摘要

结直肠癌是世界上最常见的癌症类型之一,对社会产生了重要影响。了解这种疾病的特定代谢和特定药物的转化将有助于找到有效的结直肠癌预防、诊断和治疗方法。描述药物代谢的所有术语都有助于构建本体论,以帮助科学家们链接相关信息,并找到关于这个主题最有用的数据。涉及这种代谢的分子成分包含在代谢途径等复杂网络中,以描述结直肠癌中的所有分子相互作用。处理生物信息的图形方法,如图形和复杂网络,导致通过使用拓扑指数等不变值对结直肠癌药物代谢网络进行数值特征化。因此,这种方法可以帮助科学家研究代谢途径和网络在突变、变性或进化过程中的重要元素,适用于任何类型的疾病。这篇综述介绍了结直肠癌药物代谢的本体论和复杂网络的最新研究,以及基因本体论中药物代谢过程子本体的基本拓扑特征。

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