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南极犬牙鱼(Dissostichus mawsoni)的α、β和γ晶状体蛋白的分子多样性和基因组组织。

Molecular diversity and genomic organisation of the alpha, beta and gamma eye lens crystallins from the Antarctic toothfish Dissostichus mawsoni.

机构信息

Department of Animal Biology, 515 Morrill Hall, University of Illinois at Urbana-Champaign, Urbana, Illinois 61801, USA.

出版信息

Comp Biochem Physiol Part D Genomics Proteomics. 2008 Jun;3(2):155-71. doi: 10.1016/j.cbd.2008.02.002. Epub 2008 Feb 19.

Abstract

The eye lens of the Antarctic toothfish living in the -2 degrees C Southern Ocean is cold-stable. To investigate the molecular basis of this cold stability, we isolated, cloned and sequenced 22 full length crystallin cDNAs. We found two alpha crystallins (alphaA, alphaB), six beta crystallins (betaA1, betaA2, betaA4, betaB1, betaB2, betaB3) and 14 gamma crystallins (gammaN, gammaS1, gammaS2, gammaM1, gammaM3, gammaM4, gammaM5, gammaM7, gammaM8a, gammaM8b, gammaM8c, gammaM8d, gammaM8e, and gammaM9). Alignments of alpha, beta and gamma with other known crystallin sequences indicate that toothfish alpha and beta crystallins are relatively conserved orthologues of their vertebrate counterparts, but the toothfish and other fish gammaM crystallins form a distinct group that are not orthologous to mammalian gamma crystallins. A preliminary Fingerprinted Contig analysis of clones containing crystallin genes screened from a toothfish BAC library indicated alpha crystallin genes occurred in a single genomic region of ~266 kbp, beta crystallin genes in ~273 kbp, while the gamma crystallin gene family occurred in two separate regions of ~180 and ~296 kbp. In phylogenetic analysis, the gammaM isoforms of the ectothermic toothfish displayed a diversity not seen with endothermic mammalian gamma crystallins. Similar to other fishes, several toothfish gamma crystallins are methionine-rich (gammaM isoforms) which may have predisposed the toothfish lens to biochemically attenuate gamma crystallin hydrophobicity allowing for cold adaptation. In addition to high methionine content, conservation of alphabeta crystallins both in sequence and abundance suggests greater functional constraints relative to gamma crystallins. Conversely, reduced constraints upon gamma crystallins could have allowed for greater evolutionary plasticity resulting in increased polydispersity of gamma crystallins contributing to the cold-stability of the Antarctic toothfish lens.

摘要

生活在-2°C 南大洋的南极牙鱼的晶状体具有冷稳定性。为了研究这种冷稳定性的分子基础,我们分离、克隆和测序了 22 个全长晶状蛋白 cDNA。我们发现了两种α晶状蛋白(αA、αB)、六种β晶状蛋白(βA1、βA2、βA4、βB1、βB2、βB3)和 14 种γ晶状蛋白(γN、γS1、γS2、γM1、γM3、γM4、γM5、γM7、γM8a、γM8b、γM8c、γM8d、γM8e 和γM9)。α、β和γ与其他已知晶状蛋白序列的比对表明,南极牙鱼的α和β晶状蛋白是其脊椎动物对应物相对保守的同源物,但南极牙鱼和其他鱼类的γM 晶状蛋白形成了一个独特的群体,与哺乳动物的γ晶状蛋白没有同源性。对从南极牙鱼 BAC 文库中筛选出的包含晶状蛋白基因的克隆进行的初步指纹图谱分析表明,α晶状蛋白基因位于约 266 kbp 的单个基因组区域,β晶状蛋白基因位于约 273 kbp,而γ晶状蛋白基因家族则位于两个独立的区域,分别约为 180 和 296 kbp。在系统发育分析中,冷血的南极牙鱼的γM 同工型显示出与温血哺乳动物的γ晶状蛋白不同的多样性。与其他鱼类一样,南极牙鱼的几种γ晶状蛋白富含甲硫氨酸(γM 同工型),这可能使南极牙鱼的晶状体在生物化学上具有降低γ晶状蛋白疏水性的能力,从而适应寒冷。除了甲硫氨酸含量高外,αβ晶状蛋白在序列和丰度上的保守性表明,与γ晶状蛋白相比,其受到更大的功能限制。相反,对γ晶状蛋白的限制减少可能导致更大的进化可塑性,从而增加γ晶状蛋白的多分散性,有助于南极牙鱼晶状体的冷稳定性。

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