Victorian Infectious Diseases Reference Laboratory, Melbourne, Australia.
PLoS One. 2010 Jun 28;5(6):e11341. doi: 10.1371/journal.pone.0011341.
In mid-June 2009 the State of Victoria in Australia appeared to have the highest notification rate of pandemic (H1N1) 2009 influenza in the world. We hypothesise that this was because community transmission of pandemic influenza was already well established in Victoria at the time testing for the novel virus commenced. In contrast, this was not true for the pandemic in other parts of Australia, including Western Australia (WA).
We used data from detailed case follow-up of patients with confirmed infection in Victoria and WA to demonstrate the difference in the pandemic curve in two Australian states on opposite sides of the continent. We modelled the pandemic in both states, using a susceptible-infected-removed model with Bayesian inference accounting for imported cases.
Epidemic transmission occurred earlier in Victoria and later in WA. Only 5% of the first 100 Victorian cases were not locally acquired and three of these were brothers in one family. By contrast, 53% of the first 102 cases in WA were associated with importation from Victoria. Using plausible model input data, estimation of the effective reproductive number for the Victorian epidemic required us to invoke an earlier date for commencement of transmission to explain the observed data. This was not required in modelling the epidemic in WA.
Strong circumstantial evidence, supported by modelling, suggests community transmission of pandemic influenza was well established in Victoria, but not in WA, at the time testing for the novel virus commenced in Australia. The virus is likely to have entered Victoria and already become established around the time it was first identified in the US and Mexico.
2009 年 6 月中旬,澳大利亚维多利亚州似乎出现了全球最高的大流行性(H1N1)2009 流感通报率。我们假设,这是因为在开始对新型病毒进行检测时,大流行性流感已在维多利亚州社区中得到很好的传播。相比之下,这在澳大利亚其他地区(包括西澳大利亚州)并不成立。
我们使用详细的病例跟踪数据,对维多利亚州和西澳大利亚州的确诊感染患者进行了分析,以展示两个位于大陆两侧的澳大利亚州之间大流行曲线的差异。我们使用具有贝叶斯推理的易感-感染-清除模型,对两个州的大流行进行建模,以解释输入的输入。
在维多利亚州,流行传播发生得更早,而在西澳大利亚州则发生得更晚。在最初的 100 例维多利亚州病例中,只有 5%不是本地获得的,其中有 3 例是一个家庭中的兄弟。相比之下,在西澳大利亚州最初的 102 例病例中,有 53%与从维多利亚州输入有关。使用合理的模型输入数据,我们需要将传播的开始日期提前到估计维多利亚州流行的有效繁殖数,以解释观察到的数据。在对西澳大利亚州的流行进行建模时,这是不需要的。
有力的间接证据,加上建模的支持,表明在澳大利亚开始对新型病毒进行检测时,大流行性流感在维多利亚州的社区传播已经很好地建立起来,但在西澳大利亚州则没有。该病毒很可能在首次在美国和墨西哥发现时就已经进入维多利亚州并已经得到了很好的传播。