Department of Structural Biology, University of Toyama, Toyama 930-0194, Japan.
J Mol Biol. 2011 Jan 14;405(2):560-9. doi: 10.1016/j.jmb.2010.11.024. Epub 2010 Nov 20.
Physarum polycephalum hemagglutinin I (HA1) is a 104-residue protein that is secreted to extracellular space. The crystal structure of HA1 has a β-sandwich fold found among lectin structures, such as legume lectins and galectins. Interestingly, the β-sandwich of HA1 lacks a jelly roll motif and is essentially composed of two simple up-and-down β-sheets. This up-and-down β-sheet motif is well conserved in other legume lectin-like proteins derived from animals, plants, bacteria, and viruses. It is more noteworthy that the up-and-down β-sheet motif includes many residues that make contact with the target carbohydrates. Our NMR data demonstrate that HA1 lacking a jelly roll motif also binds to its target glycopeptide. Taken together, these data show that the up-and-down β-sheet motif provides a fundamental scaffold for the binding of legume lectin-like proteins to the target carbohydrates, and the structure of HA1 suggests a minimal carbohydrate recognition domain.
多头绒泡菌凝集素 I(HA1)是一种 104 个残基的分泌蛋白,定位于细胞外空间。HA1 的晶体结构具有在凝集素结构中发现的β-三明治折叠,例如豆科植物凝集素和半乳糖凝集素。有趣的是,HA1 的β-三明治结构缺乏果冻卷基序,基本上由两个简单的上下β-折叠组成。这种上下β-折叠基序在其他来源于动物、植物、细菌和病毒的豆科植物凝集素样蛋白中得到很好的保守。更值得注意的是,上下β-折叠基序包含许多与靶碳水化合物接触的残基。我们的 NMR 数据表明,缺乏果冻卷基序的 HA1 也能与靶糖肽结合。综上所述,这些数据表明,上下β-折叠基序为豆科植物凝集素样蛋白与靶碳水化合物的结合提供了一个基本的支架,而 HA1 的结构则提示了一个最小的碳水化合物识别结构域。