Institute of Biology, Leiden University, PO Box 9505, 2300 RA Leiden, The Netherlands.
BMC Ecol. 2011 Jan 27;11:4. doi: 10.1186/1472-6785-11-4.
The genetic structure of populations can be influenced by geographic isolation (including physical distance) and ecology. We examined these effects in Leptopilina boulardi, a parasitoid of Drosophila of African origin and widely distributed over temperate and (sub) tropical climates.
We sampled 11 populations of L. boulardi from five climatic zones in Iran and measured genetic differentiation at nuclear (Amplified Fragment Length Polymorphism; AFLP) and mitochondrial (Cytochrome Oxidase I; COI) loci. An Analysis of Molecular Variance (AMOVA) for the AFLP data revealed that 67.45% of variation resided between populations. No significant variation was observed between climatic zones. However, a significant difference was detected between populations from the central (dry) regions and those from the wetter north, which are separated by desert. A similarly clear cut genetic differentiation between populations from the central part of Iran and those from the north was observed by UPGMA cluster analysis and Principal Coordinates Analysis (PCO). Both UPGMA and PCO further separated two populations from the very humid western Caspian Sea coast (zone 3) from other northern populations from the temperate Caspian Sea coastal plain (zone 2), which are connected by forest. One population (Nour) was genetically intermediate between these two zones, indicating some gene flow between these two groups of populations. In all analyses a mountain population, Sorkhabad was found to be genetically identical to those from the nearby coastal plain (zone 2), which indicates high gene flow between these populations over a short geographical distance. One population from the Caspian coast (Astaneh) was genetically highly diverged from all other populations. A partial Mantel test showed a highly significant positive correlation between genetic and geographic distances, as well as separation by the deserts of central Iran. The COI sequences were highly conserved among all populations.
The Iranian populations of L. boulardi showed clear genetic structure in AFLP profiles, but not in COI sequence data. The transfer of fruits containing Drosophila larvae parasitized by L. boulardi appears to have caused some unexpected gene flow and changed the genetic composition of populations, particularly in urban areas. Nevertheless, our results suggest that climate, geographic distance and physical barriers may all have contributed to the formation of genetically distinct populations of L. boulardi. Inevitably, there will be overlap between the portions of variance explained by these variables. Disentangling the relative contributions of climate and geography to the genetic structure of this species will require additional sampling.
种群的遗传结构可能受到地理隔离(包括物理距离)和生态的影响。我们研究了起源于非洲的果蝇寄生蜂 Leptopilina boulardi 的这些影响,该物种广泛分布于温带和(亚热带)气候区。
我们从伊朗的五个气候区采集了 11 个 L. boulardi 种群样本,并测量了核(扩增片段长度多态性;AFLP)和线粒体(细胞色素氧化酶 I;COI)基因座的遗传分化。基于 AFLP 数据的分子方差分析(AMOVA)表明,种群间的变异有 67.45%。各气候区之间没有观察到显著的变异。然而,在来自干旱中部地区的种群和来自更湿润北部地区的种群之间,存在显著差异,这两个地区之间被沙漠隔开。通过 UPGMA 聚类分析和主坐标分析(PCO),可以观察到来自伊朗中部的种群与来自北部的种群之间同样明显的遗传分化。UPGMA 和 PCO 进一步将来自非常潮湿的里海西海岸(第 3 区)的两个种群与来自温带里海沿海平原(第 2 区)的其他北部种群分开,这两个区之间有森林相连。一个种群(Nour)在这两个区之间的遗传上处于中间位置,表明这两个种群之间有一定的基因流。在所有分析中,一个山区种群(Sorkhabad)与附近沿海平原(第 2 区)的种群遗传上完全相同,这表明这些种群之间在短距离内有较高的基因流。一个来自里海岸边的种群(Astaneh)与所有其他种群在遗传上高度分化。部分 Mantel 检验显示,遗传距离和地理距离之间存在高度显著的正相关,以及伊朗中部沙漠的隔离。所有种群的 COI 序列都高度保守。
伊朗的 L. boulardi 种群在 AFLP 图谱中表现出明显的遗传结构,但在 COI 序列数据中没有表现出明显的遗传结构。携带被 L. boulardi 寄生的果蝇幼虫的果实的转移似乎导致了一些意想不到的基因流,并改变了种群的遗传组成,特别是在城市地区。尽管如此,我们的研究结果表明,气候、地理距离和物理障碍都可能促成了遗传上不同的 L. boulardi 种群的形成。这些变量解释的方差部分不可避免地会有重叠。要确定气候和地理因素对该物种遗传结构的相对贡献,还需要进一步采样。