Trigui Hana, Masmoudi Salma, Brochier-Armanet Céline, Maalej Sami, Dukan Sam
Laboratoire de Chimie Bactérienne, Aix Marseille Université, UPR 9043-CNRS, 31 Chemin Joseph Aiguier, 13402 Marseille Cedex 20, France.
Int J Microbiol. 2011;2011:240191. doi: 10.1155/2011/240191. Epub 2011 Jun 2.
An extremely halophilic archaeon, strain ETD6, was isolated from a marine solar saltern in Sfax, Tunisia. Analysis of the 16S rRNA gene sequence showed that the isolate was phylogenetically related to species of the genus Halorubrum among the family Halobacteriaceae, with a close relationship to Hrr. xinjiangense (99.77% of identity). However, value for DNA-DNA hybridization between strain ETD6 and Hrr.xinjiangense were about 24.5%. The G+C content of the genomic DNA was 65.1 mol% (T(m)). Strain ETD6 grew in 15-35% (w/v) NaCl. The temperature and pH ranges for growth were 20-55°C and 6-9, respectively. Optimal growth occurred at 25% NaCl, 37°C, and pH 7.4. The results of the DNA hybridization against Hrr. xinjiangense and physiological and biochemical tests allowed genotypic and phenotypic differentiation of strain ETD6 from other Hrr. species. Therefore, strain ETD6 represents a novel species of the genus Halorubrum, for which the name Hrr. sfaxense sp. nov. is proposed. The Genbank EMBL-EBI accession number is GU724599.
从突尼斯斯法克斯的一个海洋太阳能盐场中分离出了一种极端嗜盐古菌,菌株ETD6。对16S rRNA基因序列的分析表明,该分离株在系统发育上与嗜盐杆菌科中的嗜盐红菌属物种相关,与新疆嗜盐红菌关系密切(同一性为99.77%)。然而,菌株ETD6与新疆嗜盐红菌之间的DNA-DNA杂交值约为24.5%。基因组DNA的G+C含量为65.1 mol%(熔解温度)。菌株ETD6在15-35%(w/v)NaCl中生长。生长的温度和pH范围分别为20-55°C和6-9。在25% NaCl、37°C和pH 7.4条件下生长最佳。针对新疆嗜盐红菌的DNA杂交结果以及生理生化测试使得菌株ETD6能够与其他嗜盐红菌属物种进行基因型和表型区分。因此,菌株ETD6代表了嗜盐红菌属的一个新物种,为此提出了新名称嗜盐红菌斯法克斯种(Halorubrum sfaxense sp. nov.)。Genbank EMBL-EBI登录号为GU724599。